Pairwise Alignments

Query, 478 a.a., two-component system DNA-binding transcriptional dual regulator GlnL/GlnG from Pseudomonas putida KT2440

Subject, 466 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

 Score =  301 bits (770), Expect = 4e-86
 Identities = 174/475 (36%), Positives = 274/475 (57%), Gaps = 22/475 (4%)

Query: 7   VWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMGRLARQQPDVIISDIRMPGT--SGL 64
           + IVDD+  IR +L   L+ EG  T+    AD     +  + P V+I DI M G+   GL
Sbjct: 5   ILIVDDEEDIRMMLAGILEDEGYDTRVAVDADSCFKAIDERTPAVVILDIWMQGSRLDGL 64

Query: 65  DLLAQIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVSLVKRANQHAQ 124
            +L ++   HP LPV++++ H  +++AV++ + GAF+++ KPF  D  + +++RA + AQ
Sbjct: 65  QVLEELARDHPYLPVVMISGHGTIETAVSAIKQGAFDFIEKPFKADRLLLIIQRAIETAQ 124

Query: 125 -EQQGLDVPQNLARTPEIIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKELVAHALH 183
            + +  ++        ++IG++  +  V + I +++ +   VLI+G  GTGKE+VA  +H
Sbjct: 125 LKLENAELRMRAGPETQMIGDSALIGHVAQTIAKVAPTGSRVLISGPPGTGKEVVARMIH 184

Query: 184 RHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRR-GRFEQADGGTLFLDEI 242
            HSPRA +  + +N AA+  D ME EL G E G+  GA + R+ G FEQADGGTL LDE+
Sbjct: 185 AHSPRAQNRLVVVNCAAMHPDRMEIELLGAEPGSGDGADSYRKIGLFEQADGGTLLLDEV 244

Query: 243 GDMPADTQTRLLRVLADGEFYRVGGHVPVKVDVRIIAATHQNLESLVQAGKFREDLFHRL 302
            DMP +TQ +++R+L D  F RVGG   ++VDVR+IA+T+++L   +  G+FREDL++RL
Sbjct: 245 ADMPLETQGKIVRILQDQSFERVGGGRRIRVDVRVIASTNRDLAQEIALGRFREDLYYRL 304

Query: 303 NVIRIHIPRLADRREDIPALARHFLARAAQELAVEPKILKPETEEFIRNLPWPGNVRQME 362
           NV+ I +P L +RREDI  LA HF+ RAA    + P+    +    +++  WPGNVRQ+ 
Sbjct: 305 NVVPIRLPALRERREDITPLALHFMDRAASSAGLPPRPFGEDALAALQSYDWPGNVRQLR 364

Query: 363 NTCRWITVMA--SSREVLIGD-LPPELLNLPHDAAPVTNWEQALRQWADQALARGQTSLL 419
           N   W+ +MA   +RE +  D LP E+ ++  D+  +    + +            T  L
Sbjct: 365 NVVDWLLIMAPGEAREAIRADMLPAEIGSVTPDSLRLDRSGEIM------------TLPL 412

Query: 420 DSAVPSFERIMIETALKHTAGRRRDAALLLGWGRNTLTRKIKELGMNVAGGDDEE 474
             A   FER  +   +    G     A  +G  R+ L RK+K LG+   GG D +
Sbjct: 413 REAREMFERDYLIAQVTRFGGNVSKTAEFVGMERSALHRKLKSLGV---GGSDRQ 464