Pairwise Alignments

Query, 606 a.a., ribosome associated GTPase from Pseudomonas putida KT2440

Subject, 596 a.a., GTP-binding protein LepA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  161 bits (407), Expect = 8e-44
 Identities = 150/563 (26%), Positives = 255/563 (45%), Gaps = 75/563 (13%)

Query: 2   IENLRNIAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKNT 61
           ++++RN +IIAH+DHGK+TL D+L++  G L   E+ D +V+DS D E+ERGITI A++ 
Sbjct: 1   MKHIRNFSIIAHIDHGKSTLSDRLIQVCGGLSDREM-DAQVLDSMDLERERGITIKAQSV 59

Query: 62  AINW---NG--YHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKA 116
            + +   NG  Y +N +DTPGH DF  EV R ++  +  LL+VDA  G   QT      A
Sbjct: 60  TLEYKAKNGEIYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTA 119

Query: 117 FEAGLKPIVVINKVDRPGARPDWVLDQIFDLFDNLGATDEQLDFKVVYASALNGIAGLDH 176
            +  L  + ++NK+D P A P+ V  +I D               +V   A+N +     
Sbjct: 120 LDMNLDVVPILNKIDLPQADPERVAAEIED---------------IVGIDAMNAVRCSAK 164

Query: 177 TAMAEDMTPLYQSIVDNVPAPSVDRDGPFQMQISALDYNSFLGVIGVGRIARGRVKPNTP 236
           T +  D   + + IV+ +P P  + D P Q  I    ++S+LGV+ + RI  G +K    
Sbjct: 165 TGVGID--DVLEVIVEQIPPPEGNPDAPLQALIIDSWFDSYLGVVSLVRIKHGVLKKGDK 222

Query: 237 VVAIDTNGKKRNGRILKLMGHHGLHRVDVEEAQAGDI-VCISGFDELF---ISDTLCAPD 292
              + T       R+    G     + D  E + G++   I+G  E+    + DTL    
Sbjct: 223 FKVMSTGQNHTADRV----GIFTPKQTDKTELKTGEVGFVIAGIKEIHGAPVGDTLTLAK 278

Query: 293 AVEAMKPL----TVDEPTVSMTFQVNDSPFCGKEGKFVTSRNIKDRLDKELLYNVALRVQ 348
              A KPL     V     +  F ++   +           N +D L+K  L + +L  +
Sbjct: 279 N-GADKPLPGFKKVKPQVYAGVFPISTDEY----------ENFRDALNKLSLNDASLFFE 327

Query: 349 ETDSPD---KFKVSGRGELHLSVLIETMRRE-GFEMAVGRPEVI---------------- 388
              S      F++   G LH+ ++ E + RE   ++    P V+                
Sbjct: 328 PESSSALGFGFRIGYLGLLHMEIIQERLEREYDLDLITTAPTVVYEVLMTSGETIYVDNP 387

Query: 389 --IREVDGVKQ--EPFENVTIDIPEESQGKVMEEMGLRKGDLTNMVPDGKGRVRLEYNIP 444
             +  ++ +++  EP     I +P+E  G V+     ++G   NMV  G  +V + Y++P
Sbjct: 388 ADLPAINNIEEMREPIVEANILVPKEYLGNVITLCIEKRGTQVNMVYHG-NQVAVTYHLP 446

Query: 445 -ARGLIGFRNQFLTLTNGAGILTSIFDRYDTMKSGQMSGRLNGVLVSVETGKALTYSLET 503
            A  ++ F ++  + + G   L   F R+D     ++   +NG  V      A+      
Sbjct: 447 MAEVVMDFFDRLKSTSRGYASLEYNFIRFDPADMVRLDILINGDRVD---ALAMIIHRSN 503

Query: 504 LQARGKLFVEHGQEIYNGQIIGL 526
           ++ RG   VE  +E+   Q+  +
Sbjct: 504 IRHRGLALVEKMKELIPRQMFDI 526