Pairwise Alignments

Query, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 251 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

 Score =  103 bits (258), Expect = 3e-27
 Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 13/257 (5%)

Query: 2   IKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFEV 61
           +K Y   LL    +L+  T A A           LR+G +  Y PF + +  G+++GF++
Sbjct: 1   MKSYKKILLTAAASLIIGTQAFAAE--------KLRIGTEGAYPPFNLIDASGKVVGFDL 52

Query: 62  DILKAMAKSMGVKFEAVSTAYDGIIPALLTDKFDMIGSGMTLTQERNLRLNFSEPFIVVG 121
           DI  A+   M V+ E V++ +DGIIPAL   KFD + + M++T+ER   ++F++ +    
Sbjct: 53  DISHALCAKMKVECEVVTSDWDGIIPALNAGKFDFLAASMSVTEERKNAVDFTDHYYTNK 112

Query: 122 QTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLISKAKYHGYDNEQEAVMDV 181
              +  K +  E ++ +     K     +    G  +   L        YD ++ A +D+
Sbjct: 113 LQFVAPKNV--EFQTDEGYLKGKVIGAQRATIAGTWLEDNLDRVVDIKLYDTQENAYLDL 170

Query: 182 VNGKADAFVYDAPYNVVAVDKAGAGK-LLFLDEP-FTYEPLAFGLKKGDYDSINFINNFL 239
            +G+ D  + D       + K+ AGK   F  EP F  + +A  ++KG+ +    +N  L
Sbjct: 171 ASGRVDGILADTFVQWEWL-KSDAGKNFEFKGEPVFDDDKIAIAVRKGNDELRERLNKAL 229

Query: 240 HQIKHDGTYDRIHDKWF 256
            +I  DGTY +I+DK+F
Sbjct: 230 AEIIADGTYKQINDKYF 246