Pairwise Alignments

Query, 235 a.a., Ribosomal RNA small subunit methyltransferase E from Pseudomonas putida KT2440

Subject, 238 a.a., RNA methyltransferase, RsmE family from Pseudomonas stutzeri RCH2

 Score = 49.3 bits (116), Expect = 7e-11
 Identities = 54/220 (24%), Positives = 86/220 (39%), Gaps = 29/220 (13%)

Query: 26  HMQEIHRVAVGDNLRVGRINGLMGRATVLRLEKHEA--ELEVAFDQQPPAKLPLTLVLAV 83
           ++  + R+  G  +++   +G   R  +L + K     EL       P + L + L   +
Sbjct: 26  YIGRVLRLTAGSAVQLFDGSGDEFRGELLEVGKKTVTVELHEHLKGMPESALQIHLGQGL 85

Query: 84  PRPKMLRRLFQTVATLGVPRL---------ILLNSYKVEK--SFWQTPFLQPDTIRENLI 132
            R + +    Q    LGV ++         + LN  + +K  + W          R+  I
Sbjct: 86  SRGERMDWAIQKATELGVAQITPIISERCEVRLNDERADKRLAHW----------RQIAI 135

Query: 133 LGLEQARDTVLPEVIIEKRFKPFVEDRLPTIAAGTLGLVGHPGPYPACPRAVEQAVTLAI 192
              EQ   +VLP +      + ++           L LV HP   P    A  + +   I
Sbjct: 136 SACEQCGRSVLPIIHAPVSLRDWLA------VEAELKLVLHPIAEPLASHAKPRTLAFLI 189

Query: 193 GPEGGWIPYEVDLLGKAGLAPVQLGDRILRVETAVTALLS 232
           GPEGG    EV+     G  P +LG R+LR ETA    LS
Sbjct: 190 GPEGGLSENEVEQAAVQGFLPARLGPRVLRTETAPVVALS 229