Pairwise Alignments

Query, 560 a.a., Poly(3-hydroxyalkanoate) polymerase 2 from Pseudomonas putida KT2440

Subject, 611 a.a., POLY3-hydroxybutyrate polymerase from Sinorhizobium meliloti 1021

 Score =  306 bits (785), Expect = 1e-87
 Identities = 186/546 (34%), Positives = 272/546 (49%), Gaps = 18/546 (3%)

Query: 30  DLLSTLRNVGRHGLRHPLHTAH---HLLA----LGGQLGRVMLGDTPYQP---NPRDARF 79
           D++ TL  V  + L  P  T     HLL     +  +  + M GD    P      D RF
Sbjct: 68  DMVKTLSKVSEYWLSDPRRTLEAQTHLLGSFFDMWSRTLQRMAGDAVEDPANLQRNDKRF 127

Query: 80  SDPTWSQNPFYRRGLQAYLAWQKQTRQWI-DESHLNDDDRARAHFLFNLINDALAPSNSL 138
           +D  W +NPF+    QAY        + + D   L+D  R +A F    I  AL+P+N +
Sbjct: 128 ADEDWVKNPFFDFIRQAYFVTSDWAERMVRDAEGLDDHTRHKAAFYVRQIASALSPTNFI 187

Query: 139 L-NPLAVKELFNTGGQSLVRGVAHLLDDLRHNDG--LPRQVDERAFEVGVNLAATPGAVV 195
             NP   +E   + G +LV+G+  L +D+    G    RQ D   F +G N+A TPG V+
Sbjct: 188 TTNPQLYRETVASSGANLVKGMQMLAEDIAAGRGELRLRQTDTSKFAIGENIAITPGKVI 247

Query: 196 FRNELLELIQYSPMSEKQHARPLLVVPPQINKFYIFDLSATNSFVQYMLKSGLQVFMVSW 255
            +N++ +++QY   +E    RPLL+ PP INKFY+ DL+   SF+++ +  G  VF++SW
Sbjct: 248 AQNDVCQVLQYEASTETVLKRPLLICPPWINKFYVLDLNPEKSFIKWAVDQGQTVFVISW 307

Query: 256 RNPDPRHREWGLSSYV-QALEEALNACRSISGNRDPNLMGACAGGLTMAALQGHLQAKKQ 314
            NPD RH      +Y  + +  AL+     +G R+ N +G C GG  +AA    L A + 
Sbjct: 308 VNPDERHASKDWEAYAREGIGFALDIIEQATGEREVNSIGYCVGGTLLAATLA-LHAAEG 366

Query: 315 LRRVRSATYLVSLLDSKFESPASLFADEQTIEAAKRRSYQRGVLDGGEVARIFAWMRPND 374
             R+RSAT   + +D        +F D+  I   +      G L+G ++A  F  +R ++
Sbjct: 367 DERIRSATLFTTQVDFTHAGDLKVFVDDDQIRHLEANMSATGYLEGSKMASAFNMLRASE 426

Query: 375 LIWNYWVNNYLLGKTPPAFDILYWNADSTRLPAALHGDLLEFFKLNPLTYASGLEVCGTP 434
           LIW Y+VNNYL G+ P  FD+LYWN+DSTR+PAA H   L    L        + + G  
Sbjct: 427 LIWPYFVNNYLKGQDPLPFDLLYWNSDSTRMPAANHSFYLRNCYLENRLSKGEMVLAGRR 486

Query: 435 IDLQQVNIDSFTVAGSNDHITPWDAVYRSALLLGGERRFVLANSGHIQSIINPPGNPKAY 494
           + L  V I  + +A   DHI P  +V+  +   GG+  FVL+ SGHI  ++NPP   K  
Sbjct: 487 VSLGDVKIPIYNLATKEDHIAPAKSVFLGSSSFGGKVTFVLSGSGHIAGVVNPPARSKYQ 546

Query: 495 YLANPKLSSDPRAWFHDAKRSEGSWWPLWLEWITARSGLLKAPRTELGNATYPPLGPAPG 554
           Y        D   W   AK + GSWWP W  W+  R    + P  + G      +  APG
Sbjct: 547 YWTGGAPKGDIETWMGKAKETAGSWWPHWQGWV-ERLDKRRVPARKAG-GPLNSIEEAPG 604

Query: 555 TYVLTR 560
           +YV  R
Sbjct: 605 SYVRVR 610