Pairwise Alignments

Query, 559 a.a., poly(3-hydroxyalkanoate) polymerase 1 from Pseudomonas putida KT2440

Subject, 591 a.a., class I poly(R)-hydroxyalkanoic acid synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  315 bits (806), Expect = 4e-90
 Identities = 166/499 (33%), Positives = 268/499 (53%), Gaps = 7/499 (1%)

Query: 67  KSSLAPDSDDRRFNDPAWSNNPLYRRYLQTYLAWRKELQDWVSSSD-LSPQDISRGQFVI 125
           +S +  +  D+RF+  AW  +P +    Q+YL + K   D +++ + L  +   R  F  
Sbjct: 86  QSIMEAEKGDKRFSHEAWQQDPFFNFIKQSYLLFSKTYLDTINAIEGLDEKAKERILFFS 145

Query: 126 NLMTEAMAPTNTLS-NPAAVKRFFETGGKSLLDGLSNLAKDMVNNGGMPS--QVNMDAFE 182
             M  A++P+N ++ NP  ++   E  G++L+ GL  L +D+ ++  +      N +AF 
Sbjct: 146 RQMINALSPSNFIATNPELLRLTLEKNGENLIAGLEQLKEDVASSADILKIRMTNNNAFR 205

Query: 183 VGKNLGTSEGAVVYRNDVLELIQYSPITEQVHARPLLVVPPQINKFYVFDLSPEKSLARF 242
           +G+++  + G VV++N+V ELIQY P+TEQV   PLL+VPP INK+Y+ DL  + S+ R+
Sbjct: 206 LGEDVANTPGEVVFKNEVFELIQYKPLTEQVAVTPLLIVPPFINKYYILDLREKNSMVRW 265

Query: 243 CLRSQQQTFIISWRNPTKAQREWGLSTYI-DALKEAVDAVLSITGSKDLNMLGACSGGIT 301
            +      F+ISWRNP  AQ +     Y+ + + +AV+A+ SITG + +N  G C GG  
Sbjct: 266 LVEQGHSVFMISWRNPGAAQAQLNFEDYVLEGVVKAVNAIESITGQEQINAAGYCIGGTV 325

Query: 302 CTALVGHYAAIG-ENKVNALTLLVSVLDTTMDNQVALFVDEQTLEAAKRHSYQAGVLEGS 360
               + +YAA   + ++   +   ++LD +   +V  ++++  + A +  +   G ++G 
Sbjct: 326 LATTIAYYAAKRMKKRIKTASFFTTLLDFSQPGEVGAYINDTIIRAIELQNNAKGYMDGR 385

Query: 361 EMAKVFAWMRPNDLIWNYWVNNYLLGNEPPVFDILFWNNDTTRLPAAFHGDLI-EMFKSN 419
            ++  F+ +R N L WNY+V+NYL G  P  FD+L+WN+D+T +  A H  L+ E++  N
Sbjct: 386 SLSVTFSLLRENSLYWNYYVDNYLKGQSPVDFDLLYWNSDSTNVAGACHNFLLRELYLEN 445

Query: 420 PLTRPDALEVCGTAIDLKQVKCDIYSLAGTNDHITPWPSCYRSAHLFGGKIEFVLSNSGH 479
            L +   ++V G  IDL ++K   Y ++   DHI  W   YR A   GG   FVL  SGH
Sbjct: 446 KLVQDKGVKVGGVWIDLDKIKVPSYFISTKEDHIALWQGTYRGALRTGGNKTFVLGESGH 505

Query: 480 IQSILNPPGNPKARFMTGADRPGDPVAWQENAIKHADSWWLHWQSWLGERAGALKKAPTR 539
           I  I+N P   K  +            W E A     SWW+HW  WL   A   K  P  
Sbjct: 506 IAGIVNHPDKRKYGYWVNDTLDDSAEDWLETAQHREGSWWVHWNEWLNGFADGSKVEPYP 565

Query: 540 LGNRTYAAGEASPGTYVHE 558
           LGN  Y    ++PG YV +
Sbjct: 566 LGNADYPVLYSAPGEYVKQ 584