Pairwise Alignments

Query, 447 a.a., protease HslVU, ATPase component from Pseudomonas putida KT2440

Subject, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

 Score = 94.0 bits (232), Expect = 8e-24
 Identities = 70/226 (30%), Positives = 112/226 (49%), Gaps = 23/226 (10%)

Query: 4   TPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQL--PAELRAEVTPKNILMIGPTGVG 61
           TPR+I   L+ ++IGQ+ AK+ +A+A+ N ++R++         E+   NIL+IGPTG G
Sbjct: 67  TPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSG 126

Query: 62  KTEIARRLAKLANAPFLKVEATKFTEVGYVGRDVESIIR--------DLADAALKMLREQ 113
           KT +A  LA+L + PF   +AT  TE GYVG DVE+II+        D+A A   ++   
Sbjct: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYID 186

Query: 114 EIIRVRHRAE------DAAEDRILDALLP--QARVTSFSEEAAQTSSDSNTRQLFRKRLR 165
           EI ++  ++E      D + + +  ALL   +  V S   +  +        Q+   ++ 
Sbjct: 187 EIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSKIL 246

Query: 166 ---EGQLD--DKEIEIEVADAVGVEIAAPPGMEEMTNQLQSLFANM 206
               G     DK IE  VA   G+   A    ++ +  L  LF  +
Sbjct: 247 FICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQV 292



 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 81/263 (30%), Positives = 116/263 (44%), Gaps = 62/263 (23%)

Query: 228 EEASRLVNEEELKAKALEAVEQHGIVFIDEIDKVAKRGNVGGA--DVSREGVQRDLLPLI 285
           E+   ++ +   K     A  + GIV+IDEIDK++++        DVS EGVQ+ LL LI
Sbjct: 158 EDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLI 217

Query: 286 EGCTVNT-----------KLGMVKTDHILFIASGAFH----------------------- 311
           EG   +            +   V T  ILFI  GAF                        
Sbjct: 218 EGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVR 277

Query: 312 -------LSK------PSDLV-----PELQGRLPIRVELKALTPEDFERILQEPHASLTE 353
                  LS+      P DLV     PE  GRLP+   L  L      +IL EP  +LT+
Sbjct: 278 SKDNSKTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTK 337

Query: 354 QYQALLKTEGLNIEFLADGIKRLAEIAYQVNEKTENIGARRLHTLLERLLEEVSFSAGDL 413
           QY AL + E +++EF  D +K +A  A  +  KT   GAR L ++LE +L E  +   +L
Sbjct: 338 QYAALFELENVDLEFREDALKAIA--AKAMKRKT---GARGLRSILEAVLLETMY---EL 389

Query: 414 ASTHDEAPIQIDAAYVNSHLGEL 436
            S  + + + ID + +N     L
Sbjct: 390 PSMEEVSKVVIDESVINGESAPL 412