Pairwise Alignments

Query, 447 a.a., protease HslVU, ATPase component from Pseudomonas putida KT2440

Subject, 427 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Pseudomonas syringae pv. syringae B728a

 Score = 89.0 bits (219), Expect = 3e-22
 Identities = 46/101 (45%), Positives = 68/101 (67%), Gaps = 2/101 (1%)

Query: 4   TPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPAELR--AEVTPKNILMIGPTGVG 61
           +P+EI   L++++IGQ+ AK+ +A+A+ N ++R+    +     E+   NIL+IGPTG G
Sbjct: 67  SPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKNDDVELGKSNILLIGPTGSG 126

Query: 62  KTEIARRLAKLANAPFLKVEATKFTEVGYVGRDVESIIRDL 102
           KT +A  LA+L N PF   +AT  TE GYVG DVE+II+ L
Sbjct: 127 KTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKL 167



 Score = 85.1 bits (209), Expect = 4e-21
 Identities = 74/235 (31%), Positives = 107/235 (45%), Gaps = 61/235 (25%)

Query: 249 QHGIVFIDEIDKVAKRGNVGGA--DVSREGVQRDLLPLIEGCTVNT-----------KLG 295
           Q GIV+IDEIDK++++ +      DVS EGVQ+ LL LIEG   +            +  
Sbjct: 179 QMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFL 238

Query: 296 MVKTDHILFIASGAFH-LSK----------------------------------PSDLV- 319
            V T +ILFI  GAF  L K                                  P DLV 
Sbjct: 239 QVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVGESLREVEPDDLVK 298

Query: 320 ----PELQGRLPIRVELKALTPEDFERILQEPHASLTEQYQALLKTEGLNIEFLADGIKR 375
               PE  GRLP+   L  L      +IL EP  +LT+QY  L + EG+++EF  D +K 
Sbjct: 299 FGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKS 358

Query: 376 LAEIAYQVNEKTENIGARRLHTLLERLLEEVSFSAGDLASTHDEAPIQIDAAYVN 430
           +A  A +        GAR L ++LE +L +  +   ++ S  D + + ID + ++
Sbjct: 359 VARRALE-----RKTGARGLRSILEGVLLDTMY---EIPSQSDVSKVVIDESVID 405