Pairwise Alignments

Query, 447 a.a., protease HslVU, ATPase component from Pseudomonas putida KT2440

Subject, 449 a.a., ATP-dependent protease ATP-binding subunit from Synechococcus elongatus PCC 7942

 Score = 90.5 bits (223), Expect = 1e-22
 Identities = 52/138 (37%), Positives = 83/138 (60%), Gaps = 13/138 (9%)

Query: 5   PREIVHELNRHIIGQDDAKRAVAIALRNRWRRM--QLPAELRAE---VTPKNILMIGPTG 59
           P +I   L+ H+IGQ++AK+ +++A+ N ++R+  Q  AE   E   +   NIL+IGPTG
Sbjct: 89  PHDIKRYLDHHVIGQNEAKKMLSVAVYNHYKRLAYQQSAEEAGETIEIQKSNILLIGPTG 148

Query: 60  VGKTEIARRLAKLANAPFLKVEATKFTEVGYVGRDVESII--------RDLADAALKMLR 111
            GKT +A+ LAKL + PF   +AT  TE GYVG DVE+I+         D+ +A   ++ 
Sbjct: 149 CGKTLLAQTLAKLLDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDIEEAQRGIIY 208

Query: 112 EQEIIRVRHRAEDAAEDR 129
             EI ++  ++E+ +  R
Sbjct: 209 IDEIDKIARKSENPSITR 226



 Score = 79.3 bits (194), Expect = 2e-19
 Identities = 64/214 (29%), Positives = 93/214 (43%), Gaps = 60/214 (28%)

Query: 249 QHGIVFIDEIDKVAKRGNVGGA--DVSREGVQRDLLPLIEGCTVNTKLG----------- 295
           Q GI++IDEIDK+A++        DVS EGVQ+ LL ++EG   N               
Sbjct: 203 QRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPPQGGRKHPYQDCI 262

Query: 296 MVKTDHILFIASGAF------------------------------------HLSKPSDLV 319
            + T +ILFI  GAF                                    H+ +P DLV
Sbjct: 263 QIDTRNILFICGGAFVGLEKLVDRRLGKKSIGFVHPEESKTKEQRAAAILRHM-EPEDLV 321

Query: 320 -----PELQGRLPIRVELKALTPEDFERILQEPHASLTEQYQALLKTEGLNIEFLADGIK 374
                PE  GR+P+   L  L       IL EP  +L +QYQ L+  + + +EF  D I+
Sbjct: 322 QFGLIPEFIGRMPVTAVLDPLDETALTEILTEPRDALVKQYQKLMHMDSVELEFRQDAIE 381

Query: 375 RLAEIAYQVNEKTENIGARRLHTLLERLLEEVSF 408
            +A  A++        GAR L  ++E ++ EV +
Sbjct: 382 AIAREAFR-----RKTGARALRGIVEEIMLEVMY 410