Pairwise Alignments

Query, 447 a.a., protease HslVU, ATPase component from Pseudomonas putida KT2440

Subject, 424 a.a., endopeptidase Clp ATP-binding regulatory subunit ClpX from Dechlorosoma suillum PS

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 46/101 (45%), Positives = 71/101 (70%), Gaps = 2/101 (1%)

Query: 4   TPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPAELR--AEVTPKNILMIGPTGVG 61
           TP+EI   L++++IGQ+ AK+ +++A+ N ++R++   +     E+   NIL+IGPTG G
Sbjct: 67  TPKEICSILDQYVIGQEVAKKILSVAVYNHYKRLRHQGKSADDVELAKSNILLIGPTGSG 126

Query: 62  KTEIARRLAKLANAPFLKVEATKFTEVGYVGRDVESIIRDL 102
           KT +A+ LA+L N PF+  +AT  TE GYVG DVE+II+ L
Sbjct: 127 KTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKL 167



 Score = 74.7 bits (182), Expect = 5e-18
 Identities = 69/235 (29%), Positives = 97/235 (41%), Gaps = 61/235 (25%)

Query: 249 QHGIVFIDEIDKVAKRGNVGG--ADVSREGVQRDLLPLIEGCTV-----------NTKLG 295
           Q GIV+IDEIDK++++ +      DVS EGVQ+ LL LIEG              N    
Sbjct: 179 QQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQDFV 238

Query: 296 MVKTDHILFIASGAF-----------------------------------HLSKPSD--- 317
            V T +ILFI  GAF                                      +P D   
Sbjct: 239 QVDTANILFICGGAFDGLEKVIRNRSTRGGIGFGAEVKSKEDKKAVGEVLRTVEPEDLIK 298

Query: 318 --LVPELQGRLPIRVELKALTPEDFERILQEPHASLTEQYQALLKTEGLNIEFLADGIKR 375
             L+PE  GRLP+   L  L+      IL EP  +L +QYQ L   EG  +E     +  
Sbjct: 299 FGLIPEFVGRLPVIATLDELSEAALVEILIEPKNALIKQYQKLFAMEGAELEVRPAALTA 358

Query: 376 LAEIAYQVNEKTENIGARRLHTLLERLLEEVSFSAGDLASTHDEAPIQIDAAYVN 430
           +A  A +        GAR L ++LE +L E  +   +L    + + + ID   ++
Sbjct: 359 IARRALE-----RKTGARGLRSILEGVLLETMY---ELPGMDNVSKVVIDEGMIS 405