Pairwise Alignments

Query, 447 a.a., protease HslVU, ATPase component from Pseudomonas putida KT2440

Subject, 423 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Burkholderia phytofirmans PsJN

 Score = 93.6 bits (231), Expect = 1e-23
 Identities = 47/100 (47%), Positives = 73/100 (73%), Gaps = 1/100 (1%)

Query: 4   TPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQ-LPAELRAEVTPKNILMIGPTGVGK 62
           +P+EI   L++++IGQ+ AK+ +A+A+ N ++R++ L  +   E++  NIL+IGPTG GK
Sbjct: 68  SPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKHLDKKDEIELSKSNILLIGPTGSGK 127

Query: 63  TEIARRLAKLANAPFLKVEATKFTEVGYVGRDVESIIRDL 102
           T +A+ LA+L N PF+  +AT  TE GYVG DVE+II+ L
Sbjct: 128 TLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKL 167



 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 68/212 (32%), Positives = 93/212 (43%), Gaps = 57/212 (26%)

Query: 249 QHGIVFIDEIDKVAKRGNVGG--ADVSREGVQRDLLPLIEGCTV-----------NTKLG 295
           Q GIV+IDEIDK++++ +      DVS EGVQ+ LL L+EG              N    
Sbjct: 179 QRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFI 238

Query: 296 MVKTDHILFIASGAFH-LSK---------------------------------PSD---- 317
            V T +ILFI  GAF  L K                                 P D    
Sbjct: 239 QVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGASVKSKQDRDAGEVLREVEPEDLIKF 298

Query: 318 -LVPELQGRLPIRVELKALTPEDFERILQEPHASLTEQYQALLKTEGLNIEFLADGIKRL 376
            L+PEL GRLP+   L  L      +IL EP  +L +QY  L   E + +E     ++ +
Sbjct: 299 GLIPELIGRLPVVATLGKLDEVALMKILVEPKNALVKQYHKLFNMERVELEIRPAALQAV 358

Query: 377 AEIAYQVNEKTENIGARRLHTLLERLLEEVSF 408
           A  A  +  KT   GAR L ++LE+ L +V +
Sbjct: 359 ARKA--IRRKT---GARGLRSILEQALLDVMY 385