Pairwise Alignments

Query, 686 a.a., Protein PilJ from Pseudomonas putida KT2440

Subject, 682 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  910 bits (2352), Expect = 0.0
 Identities = 485/673 (72%), Positives = 571/673 (84%)

Query: 8   VTATTVSPRTRSIAQITVLFLILILSIILLFANFAYLNTQSNYDKQYIGHAGELRVLSQR 67
           + A  +    RS    T LF++L++SI+LLFANFAY+NTQ+++D +YI HAGELRVLSQ+
Sbjct: 4   INANALLSGVRSNTLTTGLFVVLVVSIVLLFANFAYVNTQADHDNEYIAHAGELRVLSQQ 63

Query: 68  IAKNATEAATGKALAFKLLSDARNDFERRWGYLRQGDKSTGLPPAPPAVRDEMESVRRDW 127
           IAK+A EAATG   AF  L  ARNDF +RWGYL QG++S GLP  P ++R E+ +V +DW
Sbjct: 64  IAKDAVEAATGTQEAFASLKQARNDFNQRWGYLAQGNESIGLPAVPESLRTEVNAVEQDW 123

Query: 128 ENLRKNTDIILASEQTVLSLHQVAATLAETVPQLQVEYEKVVEILLQSGAPANQVAVAQR 187
             LR++TD IL+SEQTVLSLHQVA+TLAET+PQLQVEYE+VV+ILL+SGAPA QV+VAQR
Sbjct: 124 NTLRRDTDAILSSEQTVLSLHQVASTLAETIPQLQVEYEEVVDILLESGAPAAQVSVAQR 183

Query: 188 QLLLAERILGSVNTVLAGDDSAAQAADAFGRDAGRFGQVLEGMINGNATIQVTRVEDADA 247
           Q LLAERILGSVN VL+GD  + QAAD FGRDA  FG+VL  MI GN  + +T V D +A
Sbjct: 184 QSLLAERILGSVNKVLSGDQDSVQAADMFGRDASLFGRVLNAMIEGNVAMGITAVADDEA 243

Query: 248 RARLAEIAELFQFVAGSVDEILETSPELFRVREAAGNIFSLSQTLLDEASHLANGFENLA 307
           R RL+EIAELFQFV+GSVDEILETSPELF+VRE+A +IF +SQTLLD+ S L+ G +N A
Sbjct: 244 RDRLSEIAELFQFVSGSVDEILETSPELFQVRESANSIFEVSQTLLDKTSALSQGLQNRA 303

Query: 308 GGRTLDTVGGYVLGLLALASIILIGLVMVRTTNRQLRETAEKNERNQQAIMRLLDEIEEL 367
             R L+T+ GYVLG LALASIILIGLVMV+   R+L ETAEKNERNQ AI+RLLDEI +L
Sbjct: 304 DARYLNTILGYVLGALALASIILIGLVMVQEARRRLSETAEKNERNQAAILRLLDEIGDL 363

Query: 368 ADGDLTVTVSVTEDFTGAIADSINYSVDQLRDLVATINHSAVQVAAAVQDTQNTARQLAK 427
           ADGDLTV  +VTEDFTGAIADSINYS+DQLR+LVATIN +AVQV+ A Q+TQ TA  LA+
Sbjct: 364 ADGDLTVAATVTEDFTGAIADSINYSIDQLRELVATINQTAVQVSGAAQETQATAMHLAE 423

Query: 428 ASEHQAAQISEASEAVGDMVESIDRVSAHAYESAKVAERSVAIANKGNEVVHNTINGMDN 487
           ASEHQA +I+ AS A+ +M  SID+VSA+A ES+ VAERSVAIANKGNEVVHNTI GMDN
Sbjct: 424 ASEHQAQEIAGASAAINEMAVSIDQVSANAAESSAVAERSVAIANKGNEVVHNTITGMDN 483

Query: 488 IREQIQDTAKRIKRLGESSQEIGDIVSLIDDIADQTNILALNAAIQASLAGEAGRGFAVV 547
           IREQIQDT+KRIKRLGESSQEIGDIVSLI+DIADQTNILALNAAIQAS+AG+AGRGFAVV
Sbjct: 484 IREQIQDTSKRIKRLGESSQEIGDIVSLINDIADQTNILALNAAIQASMAGDAGRGFAVV 543

Query: 548 ADEVQRLAERSSSATRQIEALVRTIQADTNEAVISMEQTTAEVVRGARLAQDAGVALAEI 607
           ADEVQRLAERSS+AT+QIEALV+TIQ DTNEAVISMEQTT+EVVRGARLAQDAGVAL EI
Sbjct: 544 ADEVQRLAERSSAATKQIEALVKTIQTDTNEAVISMEQTTSEVVRGARLAQDAGVALEEI 603

Query: 608 EGVSQNLADLIHSISDAAQLQTSSAGQISHTMAVIQQITAQTSAGSGATADSIRHLARMA 667
           E VS+ LA LI +IS+AA+ Q SSAG IS+TM VIQ+IT+QTS+G+ ATA SI +LA+MA
Sbjct: 604 EKVSKTLAALIQNISNAARQQASSAGHISNTMNVIQEITSQTSSGTTATAKSIGNLAKMA 663

Query: 668 SEMRRSVSGFTLP 680
           +EMR SVSGFTLP
Sbjct: 664 NEMRHSVSGFTLP 676