Pairwise Alignments

Query, 686 a.a., Protein PilJ from Pseudomonas putida KT2440

Subject, 839 a.a., methyl-accepting chemotaxis sensory transducer from Synechococcus elongatus PCC 7942

 Score =  259 bits (663), Expect = 3e-73
 Identities = 152/395 (38%), Positives = 242/395 (61%), Gaps = 8/395 (2%)

Query: 288 LSQTLLDEASHLANG-FENLAGGRTLDTVGGYVLGLLALASIILIGLVMVRTTNRQLRET 346
           L + L ++   ++NG FE       L   G   +G+LAL    +  ++  R   ++ R T
Sbjct: 442 LLERLNEQCQQMSNGDFET-----PLQVGGNDDVGMLALRFDRMRSVLGDRINRQEKRLT 496

Query: 347 AEKNERN--QQAIMRLLDEIEELADGDLTVTVSVTEDFTGAIADSINYSVDQLRDLVATI 404
             + +R   Q  ++RLLD++E +A GDLTV   VT D  GA+ADS N ++  LR++VA +
Sbjct: 497 TLEQQREGLQNQVIRLLDDVEGVAHGDLTVQAEVTADVLGAVADSFNLTIQNLREIVAQV 556

Query: 405 NHSAVQVAAAVQDTQNTARQLAKASEHQAAQISEASEAVGDMVESIDRVSAHAYESAKVA 464
             +A+QV AA  D + +A+ L+  + HQA +++ A  +V  M ESI RV+  A E+  VA
Sbjct: 557 RDAALQVNAAATDNEQSAKNLSAEALHQAEELAAALNSVQVMTESIQRVAISASEAESVA 616

Query: 465 ERSVAIANKGNEVVHNTINGMDNIREQIQDTAKRIKRLGESSQEIGDIVSLIDDIADQTN 524
             +   A KG E V  T++G+  IRE + +T +++K+L ESSQEI  IV+LI  +A +TN
Sbjct: 617 RAASQTALKGGEAVDKTLSGILRIRETVAETTRKVKKLAESSQEISKIVALISQVASRTN 676

Query: 525 ILALNAAIQASLAGEAGRGFAVVADEVQRLAERSSSATRQIEALVRTIQADTNEAVISME 584
           +LALNA+I+A+ AG+AGRGFA+VADEV++LA+R++ ++++IE +V  IQ++T   + +ME
Sbjct: 677 LLALNASIEAARAGQAGRGFAIVADEVRQLADRAAKSSKEIEQIVLKIQSETGLVMTAME 736

Query: 585 QTTAEVVRGARLAQDAGVALAEIEGVSQNLADLIHSISDAAQLQTSSAGQISHTMAVIQQ 644
           + T +V++G RLA+ A  AL EI  VS  + DL+ SI+     QT+ +  ++  M  ++ 
Sbjct: 737 EGTQQVIQGTRLAEQARGALDEIIQVSTKIDDLVQSITADTVQQTAMSRSMAEVMQSVET 796

Query: 645 ITAQTSAGSGATADSIRHLARMASEMRRSVSGFTL 679
               TS  +   A S++ L  +A  +R SV  F L
Sbjct: 797 TAQNTSQEAQQVAASLQGLVNIAGTLRESVDRFRL 831