Pairwise Alignments

Query, 686 a.a., Protein PilJ from Pseudomonas putida KT2440

Subject, 640 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  163 bits (413), Expect = 2e-44
 Identities = 121/419 (28%), Positives = 214/419 (51%), Gaps = 47/419 (11%)

Query: 288 LSQTLLDEASHLANGFENLAGGRTLDTVGGYVLG----------------LLALASIILI 331
           LSQ     + +  NG + L   R + ++G Y++                  LAL  +IL 
Sbjct: 238 LSQQTFATSEYDNNGVDTLVASRYIPSIGWYLIAEVPQDELFGAINKASWQLALMGLILA 297

Query: 332 GLVMVRTTNRQLRETAEKNERNQQAIMRLLDEIEELAD---------GDLTVTVSVT-ED 381
            ++M  +                  I RL+    ELAD         GDL++ +  + +D
Sbjct: 298 AIIMFTSA---------------WLINRLISPFGELADMLKSIGEGEGDLSLRLDDSRQD 342

Query: 382 FTGAIADSINYSVDQLRDLVATINHSAVQVAAAVQDTQNTARQLAKASEHQAAQISEASE 441
            TG++A S N  V  L   + +++ +A  +  AV+   N A+ +      Q ++I + + 
Sbjct: 343 ETGSMAASYNQFVTYLSKTLQSVSATANDLFQAVERIDNQAKHMEHEINDQVSKIEQVAT 402

Query: 442 AVGDMVESIDRVSA---HAYESAKVAERSVAIANKGNEVVHNTINGMDNIREQIQDTAKR 498
           A+ +M  +   +++   +A E+A+VA++SV   N+GN+ V NTI  + ++ EQ+  T++ 
Sbjct: 403 AIHEMGMTAQEIASSANNAAENAQVADQSV---NQGNQSVQNTIASVASMSEQLLTTSET 459

Query: 499 IKRLGESSQEIGDIVSLIDDIADQTNILALNAAIQASLAGEAGRGFAVVADEVQRLAERS 558
           + +L E +  I  ++ +I  +++QTN+LALNAAI+A+ AGE GRGFAVVADEV+ LA RS
Sbjct: 460 VSQLAEDASSIDTVLEVIRGVSEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRS 519

Query: 559 SSATRQIEALVRTIQADTNEAVISMEQTTAEVVRGARLAQDAGVALAEIEGVSQNLADLI 618
            ++T  I  ++  +QA T E V ++ Q+T +  +  + A  +G  L  I    Q ++++ 
Sbjct: 520 HASTEDIRHIIEKLQAKTTEVVNAIGQSTNQSQQSQQEASLSGEHLHSIAENIQAMSEMS 579

Query: 619 HSISDAAQLQTSSAGQISHTMAVIQQITAQTSAGSGATADSIRHLARMASEMRRSVSGF 677
             I+ A + Q++  G+I+  +  I  I+  +S     T+     L  MA ++   VS F
Sbjct: 580 MQIATATEEQSNVVGEINPHVTAIADISRSSSDVVRQTSLDCSDLREMAVQLNELVSRF 638