Pairwise Alignments

Query, 686 a.a., Protein PilJ from Pseudomonas putida KT2440

Subject, 713 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

 Score =  158 bits (399), Expect = 1e-42
 Identities = 117/409 (28%), Positives = 207/409 (50%), Gaps = 28/409 (6%)

Query: 274 ELFRVREAAGNIFSLSQTLLDEASHLANGFENLAGGRTLDTVGGYVLGLLALASII---- 329
           E++R R  A  +  L   ++  A  L  G + L G      + G    LL L  +I    
Sbjct: 326 EVYRYRSIAYKLQKLYWLVVILAWGLGVGVQELLG------LSGLPARLLELGLVIGGGF 379

Query: 330 LIGLVMVRTTNRQLRETAEKNERNQQAIMRLLDEIEELADGDLTVTVSVTE---DFTGAI 386
              L  ++  +++LR+++        +++R + E      GDL+  +  +E   D T  +
Sbjct: 380 FFNLFGMKPLSQRLRKSS--------SVLRSIAE----GGGDLSQRLPTSEGGSDETTVM 427

Query: 387 ADSINYSVDQLRDLVATINHSAVQVAAAVQDTQNTARQLAKASEHQAAQISEASEAVGDM 446
           +  IN  +D L  ++  +  ++ ++       Q  +R  A AS   AA++ E  E++   
Sbjct: 428 SQWINSFIDNLEQIIRRVIQTSGEIDGTNGTLQEKSRATALASAQMAAEMRETEESIRGQ 487

Query: 447 VESIDRVSAHAYESAKVAERSVAIANKGNEVVHNTINGMDNIREQIQDTAKRIKRLGESS 506
           VE I+  S       +   +  A A +  E+V +   G   I E +    + I+ L  S+
Sbjct: 488 VEDINAASQKVEAMREAVAQVTAEARRQMELVQSRSAG---ILESVGGATRTIRDLESST 544

Query: 507 QEIGDIVSLIDDIADQTNILALNAAIQASLAGEAGRGFAVVADEVQRLAERSSSATRQIE 566
            EIG I ++I +IA QTN+LALNAAI+A+ AGEAGRGFAVVADEV++LAER++ AT++I 
Sbjct: 545 AEIGRIGTVIHEIASQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAERTADATKEIA 604

Query: 567 ALVRTIQADTNEAVISMEQTTAEVVRGARLAQDAGVALAEIEGVSQNLADLIHSISDAAQ 626
           A++  +Q+   +AV+SM+   +E+  G RLA DA     E++ + ++L   I  +  A +
Sbjct: 605 AMIGGVQSRAEDAVVSMDTGMSELEEGLRLAADAASEKQEVQDILEHLFATIDELEAATR 664

Query: 627 LQTSSAGQISHTMAVIQQITAQTSAGSGATADSIRHLARMASEMRRSVS 675
                   I+     ++Q   ++S  +  T+ ++R L ++  + + S +
Sbjct: 665 ATGGRIETIAVAAEAVRQSVDESSRSTALTSGAVRTLDQLVGQFKVSAA 713



 Score = 39.7 bits (91), Expect = 5e-07
 Identities = 57/255 (22%), Positives = 106/255 (41%), Gaps = 20/255 (7%)

Query: 229 GMING-NATIQVTRVEDADARARLA-EIAELFQFVAGSVDEILETSPELFRVREAAGNIF 286
           G I+G N T+Q      A A A++A E+ E  + + G V++I   S ++  +REA   + 
Sbjct: 450 GEIDGTNGTLQEKSRATALASAQMAAEMRETEESIRGQVEDINAASQKVEAMREAVAQVT 509

Query: 287 SLSQTLLDEASHLANGFENLAGGRTLDTVGGYVLGLLALASIILIGLVMVRTTNRQLRET 346
           + ++  ++     + G     GG T  T+         +  I  +   +   TN      
Sbjct: 510 AEARRQMELVQSRSAGILESVGGAT-RTIRDLESSTAEIGRIGTVIHEIASQTNLLALNA 568

Query: 347 AEKNERNQQA---IMRLLDEIEELADGDLTVTVSVTEDFTGAIADSINYSVDQLRDLVAT 403
           A +  R  +A      + DE+ +LA+         T D T  IA  I     +  D V +
Sbjct: 569 AIEAARAGEAGRGFAVVADEVRKLAER--------TADATKEIAAMIGGVQSRAEDAVVS 620

Query: 404 INHSAVQVAAAVQ---DTQNTARQLAKASEHQAAQISE---ASEAVGDMVESIDRVSAHA 457
           ++    ++   ++   D  +  +++    EH  A I E   A+ A G  +E+I   +   
Sbjct: 621 MDTGMSELEEGLRLAADAASEKQEVQDILEHLFATIDELEAATRATGGRIETIAVAAEAV 680

Query: 458 YESAKVAERSVAIAN 472
            +S   + RS A+ +
Sbjct: 681 RQSVDESSRSTALTS 695