Pairwise Alignments

Query, 1646 a.a., signal transduction histidine kinase CheA/CheY-like receiver from Pseudomonas putida KT2440

Subject, 928 a.a., CheA signal transduction histidine kinase from Synechococcus elongatus PCC 7942

 Score =  295 bits (756), Expect = 1e-83
 Identities = 196/634 (30%), Positives = 332/634 (52%), Gaps = 44/634 (6%)

Query: 1041 VKVDAELLDDLGNLAGEHSIIRGRIE-------QQVNDAQFALNEMETTLERMRDQLLRL 1093
            ++V    LD+L NL GE  + R  +E       + + +    ++++    ERMR+   R 
Sbjct: 295  LRVPVRQLDNLSNLVGEIVVSRNTLESDQSHLRETLENLMLQVHQLGDLGERMRELYERS 354

Query: 1094 DVETQGRISSRQQFEGDAY------------DDFDPLEMDRHSQLQQLSRALFESASDLL 1141
             +ET   +++R+Q  G +             + FD LE+DR S    +S+ + E    L 
Sbjct: 355  LLETA--LAARRQLVGSSTAAGSAGASTFPTEQFDDLELDRFSGFHSISQEMMELLVRLR 412

Query: 1142 DLKETLAQRAQEAYSLLQQQ-ARVNSQLQEGLTATLMVPFERLVPRLQRVVRQVASELGK 1200
            +    +     E +  L +   ++  QLQ  L  T MVPF  L  +L R VR+++   GK
Sbjct: 413  EAASDIDFMVNEPFDQLTRNFQQITLQLQSELNQTRMVPFSDLTDQLPRAVREISRRCGK 472

Query: 1201 QVELVVGNAEGELDRSVLERMVAPLEHMLRNAVDHGLESRAMRLAAGKPEQGTIHLNLLH 1260
               L +   +  +D+ +L+++ AP+ H++ NA+ HG+E+  +R    K  +GT+ +    
Sbjct: 473  GARLEIEGKDILIDKMILQKLQAPMTHLINNALSHGIETAEIRQYRNKSAEGTLVVRASL 532

Query: 1261 EGADIVIEMTDDGAGVPLEAVRRKAIKRGLLDPQ--AQLSDHEILQFILRPGFSTAEKIT 1318
            +G   +I +TDDGAG+  E V+ KA+ RGL+ P+  A +   EI + + RPGFST ++  
Sbjct: 533  QGNRTLITVTDDGAGIDAEQVKLKALARGLITPEEAAGMRVREIYELLFRPGFSTRDQAD 592

Query: 1319 QISGRGLGMDVVHEEVKQLGGSMSIESAQGKGARFLIRLPFTVSINRALMVHLGEEQYAI 1378
            +++GRG+G+DVV   + ++ G + ++S  GKG  F  RLP T+SI +AL       + A 
Sbjct: 593  ELAGRGVGLDVVRRALHEIQGEIVVDSELGKGTTFTFRLPLTLSITKALTCLHERARLAF 652

Query: 1379 PLNTIEGIVRVPPAELAACYQLDSPRYVYAGHEYELRYLGELLQ-----GLPR-PALLGQ 1432
            P++++E ++ +P   LA   Q    R  +      +  L  LL      G  R    LG 
Sbjct: 653  PMDSVEEMLDIPQQRLAMDPQ-GQLRLDWHNLSLPVFPLSSLLDFHLPFGRSRYYNSLGD 711

Query: 1433 SVPLPVLLVHSKEQSFAIQADSLSPSREIVVKSLGPQFAAVAGLSGATLLGDGRVVLILD 1492
               + ++++ +  +  A+Q D +   REIV+K +    A   G+ G T+  DG+V+ I+D
Sbjct: 712  DGVVSIVVLRNDNEYLAVQTDQIEGEREIVIKQIEGPIAKPLGILGITVRSDGQVMPIVD 771

Query: 1493 LLGQL-----RGQQRRLARL-PGGGSQRQLLGPAPRRALLVMVVDDSVTVRKVTSRLLER 1546
            +L        R +QR++A + P  G  R    P      +V++VDDS+TVR++ S   ++
Sbjct: 772  VLELFDIAYGRVRQRQVAPVAPSAGETRTNTEP------MVLIVDDSITVRELLSMTFKK 825

Query: 1547 HGMSVLTAKDGVDAMALLEEHRP-DVLLLDIEMPRMDGFEVATRIRRDARLKDLPIIMIT 1605
             G  V  A++G +A+  L    P D++  DIEMP+M+G E+  R++ D +L+ LP+ M+T
Sbjct: 826  AGYVVEQARNGQEALEKLYSGLPCDLVFCDIEMPKMNGLELLERLQADPKLRSLPVAMLT 885

Query: 1606 SRTGQKHRDRAMAIGVNEYLGKPYQESLLLQSIA 1639
            SR   +HR  A  +G   Y  KPY E  LL++ A
Sbjct: 886  SRGADRHRQIAAHLGARAYFTKPYLEEQLLEASA 919



 Score = 33.9 bits (76), Expect = 9e-05
 Identities = 22/74 (29%), Positives = 35/74 (47%)

Query: 438 DDELRQVFLDEAGELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAVAE 497
           D+ LR +FL E  E L  + +   +  A     +   +  RA H+LKG   ++  E   +
Sbjct: 6   DNVLRSLFLRETRENLQLLTQMIGQMEAGLPDAKTFADASRAAHSLKGGAALLKFETFRQ 65

Query: 498 LAWGAEHLLNRVLE 511
           LA G E  L+ + E
Sbjct: 66  LAAGLETCLSLLSE 79



 Score = 33.5 bits (75), Expect = 1e-04
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 7/98 (7%)

Query: 890 LLEVFLEESSDIVESAAAALARWQADPRSSVEVDNLMRDLHTLKGVARMVEITPIGDLAH 949
           L  +FL E+ + ++     + + +A    +    +  R  H+LKG A +++      LA 
Sbjct: 9   LRSLFLRETRENLQLLTQMIGQMEAGLPDAKTFADASRAAHSLKGGAALLKFETFRQLAA 68

Query: 950 ELEFLYELLAAGRLPP---SAPLF----ALLQNCHDRL 980
            LE    LL+   LP    S PLF    ALL    DR+
Sbjct: 69  GLETCLSLLSEAELPDYEVSLPLFQRAAALLITATDRI 106



 Score = 32.7 bits (73), Expect = 2e-04
 Identities = 60/246 (24%), Positives = 90/246 (36%), Gaps = 21/246 (8%)

Query: 574 DPQLLGIFRSEAQGHLASLEVYL--QSTGGHDTPVSDDLQRALHTLKGSAAMAGVMPVAE 631
           D  L  +F  E + +L  L   +     G  D     D  RA H+LKG AA+       +
Sbjct: 6   DNVLRSLFLRETRENLQLLTQMIGQMEAGLPDAKTFADASRAAHSLKGGAALLKFETFRQ 65

Query: 632 LATAFDRLAREYKGHQLPLQMAEMEWLEAARSLFHLGLAQLDSTPLAAIPGAAE--LIEQ 689
           LA   +            L  AE+   E +  LF    A L +       G  E  ++ +
Sbjct: 66  LAAGLETCLS-------LLSEAELPDYEVSLPLFQRAAALLITATDRIEAGVEEQAVVPE 118

Query: 690 VGQAVDRRLASLHEDPHHAGRSKRDPQLVASFLAHAMDILL-DAETLLSRWQQQPGQRDA 748
            G  +  +L  L E    A +   D   V S L    D+L  D ET+L      P     
Sbjct: 119 EGNPLIEQLQVLQEMLQAAVQVPPDQSAVTSTLE---DLLTQDFETVL--LPPTPDLEQT 173

Query: 749 LDNLLDQM----TTLGHAAHLADLWQMDDVCEALLDLYGAVEEGSLPADARFFSQAQRAH 804
           LD LL  +    + +       D   ++D+   L D   A EE S   +    +Q +   
Sbjct: 174 LDQLLGDLEETPSPIAGQGSDGDRPALEDLNFDLEDWIEASEEESETVEIDIVAQVKALE 233

Query: 805 EALLDM 810
            A+ D+
Sbjct: 234 AAIADL 239