Pairwise Alignments

Query, 1646 a.a., signal transduction histidine kinase CheA/CheY-like receiver from Pseudomonas putida KT2440

Subject, 952 a.a., CheA signal transduction histidine kinase from Synechococcus elongatus PCC 7942

 Score =  308 bits (789), Expect = 2e-87
 Identities = 198/619 (31%), Positives = 322/619 (52%), Gaps = 31/619 (5%)

Query: 1041 VKVDAELLDDLGNLAGEHSIIRGRIEQQVNDAQFALNEMETTLERMRDQLLRLDVETQGR 1100
            V+V  + L+DL  L GE +I R  +  Q+   +  L  ++T + R+      L   T   
Sbjct: 335  VRVGIQQLEDLSELFGELNIERNGLSLQLKRMRQLLQTLKTKVRRLEQSSFELRSTTDRA 394

Query: 1101 ISSRQQFE------GDAYDDFDPLEMDRHSQLQQLSRALFESASDLLDLKETLAQRAQEA 1154
             ++   F          + +FD LE DR+S L  +S+ + E+   + ++   +    +E 
Sbjct: 395  ATATTAFSLVGSGGSSWHQNFDILEFDRYSPLHLVSQDVMETIVQIQEITSDIETNLEET 454

Query: 1155 YSLLQQQARVNSQLQEGLTATLMVPFERLVPRLQRVVRQVASELGKQVELVVGNAEGELD 1214
                Q   R   Q+Q  LT   M PF  LV R  R++RQ+  E GK V L++      +D
Sbjct: 455  EQTEQSLRRTAKQMQGRLTQVRMRPFADLVNRYPRMIRQLGQEYGKDVRLIINGENTLVD 514

Query: 1215 RSVLERMVAPLEHMLRNAVDHGLESRAMRLAAGKPEQGTIHLNLLHEGADIVIEMTDDGA 1274
            R++LE +  PL H++RNA DHG+ES  +R +  K    TI ++  + G   VI + DDG 
Sbjct: 515  RAILELLADPLLHLVRNAFDHGVESPQLRQSRDKSPTATIEVSAAYRGNQTVITIRDDGC 574

Query: 1275 GVPLEAVRRKAIKRGLLDPQAQ-LSDHEILQFILRPGFSTAEKITQISGRGLGMDVVHEE 1333
            GV L+ +R++A + GL     +  SD E+L  I  PGF+TAE++T++SGRG+GMDVV   
Sbjct: 575  GVDLQKIRQRAQRMGLDQSSLEAASDRELLDLIFEPGFTTAEQVTELSGRGVGMDVVRTN 634

Query: 1334 VKQLGGSMSIESAQGKGARFLIRLPFTVSINRALMVHLGEEQYAIPLNTIEGIVRVPPAE 1393
            ++Q+ G + IE+   +G  F I +PF++S+ R L++ +     AIP + IE I+ + P+ 
Sbjct: 635  LQQIRGDIQIETKPNQGTTFTITVPFSLSVARVLLIEVSNILVAIPTDVIEEIIELNPS- 693

Query: 1394 LAACYQLDSPRYVYAGHEYELRYLGELLQ----GLPRPALLGQSVPL----PVLLVHSKE 1445
                + L+S        +  L  L +L Q      P P +    VP      VLLV+   
Sbjct: 694  ----WILNSAGQTVLNLDEILVPLLQLDQWFQFSRPCPPISLDGVPTINQPTVLLVNQGN 749

Query: 1446 QSFAIQADSLSPSREIVVKSLGPQFAAVAGLSGATLLGDGRVVLILDLLGQLRGQQRRLA 1505
                IQ D     +E+ ++ +        G S  T+LGDGR+V ++D    L+  Q   +
Sbjct: 750  SFVGIQVDRYWGEQEVTIRQVNSTIPLPPGFSSCTILGDGRIVPLVDTFSLLQWIQN--S 807

Query: 1506 RLPGGGSQRQLLGPAPRRALL-----VMVVDDSVTVRKVTSRLLERHGMSVLTAKDGVDA 1560
             +P   S+  L    P    L     ++++DDS+ VR+  + +LE+ G  V  AKDG +A
Sbjct: 808  NVP---SRLSLKAIQPATYQLPSQKSILIIDDSINVRRFLANILEKAGYRVEQAKDGQEA 864

Query: 1561 MALLEEH-RPDVLLLDIEMPRMDGFEVATRIRRDARLKDLPIIMITSRTGQKHRDRAMAI 1619
            +  L++  + +  + D+EMPR+DG+   T+++      +LPI M+TSR+G KHR  A+ +
Sbjct: 865  IDKLKDGLKVEAAICDVEMPRLDGYGFLTQVKNIVAGANLPIAMLTSRSGDKHRRLALNL 924

Query: 1620 GVNEYLGKPYQESLLLQSI 1638
            G   Y  KP++E  LLQ++
Sbjct: 925  GAAAYFTKPFREPELLQTL 943



 Score = 43.1 bits (100), Expect = 2e-07
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 3/98 (3%)

Query: 894 FLEESSDIVESAAAALARW-QADPRSSVEVDNLMRDLHTLKGVARMVEITPIGDLAHELE 952
           FLEE+ + + +    L    QA  R S +VD ++R  H++KG A M+    + +LAH+LE
Sbjct: 12  FLEEAEEYLGTIEKELVDLSQASDRRS-QVDLILRAAHSIKGGAAMMGFNTLSELAHQLE 70

Query: 953 FLYELLAAGRLPPSAPLFALLQNCHDRLAHMLDAVRLG 990
             ++++ +G+    +    LLQ   DRL  +L   R G
Sbjct: 71  DFFKVMRSGKNFDQSLERQLLQGV-DRLHQVLQVNRQG 107



 Score = 36.6 bits (83), Expect = 1e-05
 Identities = 21/74 (28%), Positives = 37/74 (50%)

Query: 441 LRQVFLDEAGELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAVAELAW 500
           +R  FL+EA E L  IE+  +     + +R  +  + RA H++KG   M+    ++ELA 
Sbjct: 8   IRLQFLEEAEEYLGTIEKELVDLSQASDRRSQVDLILRAAHSIKGGAAMMGFNTLSELAH 67

Query: 501 GAEHLLNRVLEGRS 514
             E     +  G++
Sbjct: 68  QLEDFFKVMRSGKN 81



 Score = 33.5 bits (75), Expect = 1e-04
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 12/135 (8%)

Query: 581 FRSEAQGHLASLE---VYLQSTGGHDTPVSDDLQRALHTLKGSAAMAGVMPVAELA---T 634
           F  EA+ +L ++E   V L       + V D + RA H++KG AAM G   ++ELA    
Sbjct: 12  FLEEAEEYLGTIEKELVDLSQASDRRSQV-DLILRAAHSIKGGAAMMGFNTLSELAHQLE 70

Query: 635 AFDRLAREYKGHQLPLQMAEMEWLEAARSLFHLGLAQLDSTP----LAAIPGAAELIEQV 690
            F ++ R  K     L+   ++ ++    +  +     D +P        P  A L EQ 
Sbjct: 71  DFFKVMRSGKNFDQSLERQLLQGVDRLHQVLQVNRQGTDPSPQWLESQVQPLFAVLREQF 130

Query: 691 GQ-AVDRRLASLHED 704
           G    D  LA L E+
Sbjct: 131 GDPQPDADLAMLSEE 145