Pairwise Alignments

Query, 205 a.a., Channel protein, hemolysin III family from Pseudomonas putida KT2440

Subject, 236 a.a., hemolysin III family channel protein (RefSeq) from Shewanella loihica PV-4

 Score =  126 bits (316), Expect = 4e-34
 Identities = 70/201 (34%), Positives = 115/201 (57%), Gaps = 2/201 (0%)

Query: 5   ERFNAWTHLVGAVLAAIGAIWLIVAAGLQGDPWKIVSFSIYGGTLLLLYSISTLYHSTRG 64
           E  NA +H +G +   +   + +     +    ++   ++Y  +++LL+  STLYHS   
Sbjct: 36  ELANALSHGLGVIAGILALAFSLHKGWDRLTNLQLGGLALYCLSIILLFLCSTLYHSVSA 95

Query: 65  -RAKVIMRKLDHLSIYLLIAGSYTPFCLVSLRGPWGWSLFGVVWGLAIIGMLQEIKPRSE 123
            + K  ++  DH +IYLLIAG+YTP   + L      ++   +W LA+ G+L +      
Sbjct: 96  PKLKHKLKIADHCAIYLLIAGTYTPLMQILLDSVEADAILIAIWSLALGGILFKTLFIHR 155

Query: 124 ARILSIIIYAVMGWIVLVAVKPLLNSLGTAGFAWLAAGGVFYTVGIIFFAFDSRFRHWHG 183
            +I S+++Y VMGW+ ++ +K LL ++   GF  L AGG+FY+ G+IF+    R  + H 
Sbjct: 156 FKIFSLVLYLVMGWLCVIVMKQLLAAMTPLGFQLLLAGGIFYSTGVIFYV-GKRIPYNHA 214

Query: 184 IWHLFVIAGSLMHFVAVSLYV 204
           IWHLFV+AG+L HF+ V L V
Sbjct: 215 IWHLFVLAGALSHFLCVYLTV 235