Pairwise Alignments

Query, 239 a.a., 16S rRNA m3U1498 methyltransferase from Pseudomonas putida KT2440

Subject, 238 a.a., RNA methyltransferase, RsmE family from Pseudomonas stutzeri RCH2

 Score =  380 bits (976), Expect = e-110
 Identities = 188/239 (78%), Positives = 206/239 (86%), Gaps = 1/239 (0%)

Query: 1   MRLSRFFIDAPLSLGEHDLPEAQAHYIGRVLRMAPGDAVQLFDGSGQEYRGQLLEVGKKT 60
           MRLSRFFIDAPLSLG+H LPEA AHYIGRVLR+  G AVQLFDGSG E+RG+LLEVGKKT
Sbjct: 1   MRLSRFFIDAPLSLGQHPLPEASAHYIGRVLRLTAGSAVQLFDGSGDEFRGELLEVGKKT 60

Query: 61  VRVSLDQAFAGQADSPLHVHLGQGLSRGERMDWAIQKATELGANEITPIVSERCEVRLKD 120
           V V L +   G  +S L +HLGQGLSRGERMDWAIQKATELG  +ITPI+SERCEVRL D
Sbjct: 61  VTVELHEHLKGMPESALQIHLGQGLSRGERMDWAIQKATELGVAQITPIISERCEVRLND 120

Query: 121 ERADKRLAHWRQVAISACEQCGRSTLPVIHPPVTLAEWLSSTKADLKLVLHPVAEPLISH 180
           ERADKRLAHWRQ+AISACEQCGRS LP+IH PV+L +WL + +A+LKLVLHP+AEPL SH
Sbjct: 121 ERADKRLAHWRQIAISACEQCGRSVLPIIHAPVSLRDWL-AVEAELKLVLHPIAEPLASH 179

Query: 181 EKPATLAFVIGPEGGLSEAEVEQAKAAGFHAARLGPRVLRTETAPVVALSVAQQLWGDF 239
            KP TLAF+IGPEGGLSE EVEQA   GF  ARLGPRVLRTETAPVVALSVAQQLWGDF
Sbjct: 180 AKPRTLAFLIGPEGGLSENEVEQAAVQGFLPARLGPRVLRTETAPVVALSVAQQLWGDF 238