Pairwise Alignments

Query, 239 a.a., 16S rRNA m3U1498 methyltransferase from Pseudomonas putida KT2440

Subject, 243 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  112 bits (280), Expect = 7e-30
 Identities = 84/230 (36%), Positives = 115/230 (50%), Gaps = 40/230 (17%)

Query: 23  QAHYIGRVLRMAPGDAVQLFDGSGQEY------RGQLLEVGKKTV------RVSLDQAFA 70
           Q HY+ RVLR+ PGD   + DG G  +      R QL  VG   V      R++L Q+  
Sbjct: 26  QRHYLQRVLRLKPGDRCAVIDGQGGLWTAELGDRDQLFPVGAVPVLPPAQPRLTLIQSLP 85

Query: 71  GQADSPLHVHLGQGLSRGERMDWAIQKATELGANEITPIVSERCEVRLKDERADKRLAHW 130
            Q                   D  I++ATELG   I P++S+R +VR + ++ D+    W
Sbjct: 86  KQG-----------------FDEVIRQATELGVTTIQPVISDRSQVRPEAQKTDR----W 124

Query: 131 RQVAISACEQCGRSTLPVIHPPVTLAEWLSSTKAD------LKLVLHPVAEPLISHEKPA 184
           R++AI A EQ  R  LP + P    +E ++   AD      L     P   P +  +   
Sbjct: 125 RKIAIEASEQSERLYLPQLEPIRLWSEAIAQIPADSLRCICLARRSLPNLLPWLQAQPAW 184

Query: 185 T-LAFVIGPEGGLSEAEVEQAKAAGFHAARLGPRVLRTETAPVVALSVAQ 233
           T LA  IGPEGG S+AE+EQA A G+    LG  +LR  TAP+VALS+AQ
Sbjct: 185 TDLAIAIGPEGGWSDAEIEQAIAVGWTPVSLGSSILRAVTAPIVALSLAQ 234