Pairwise Alignments

Query, 239 a.a., 16S rRNA m3U1498 methyltransferase from Pseudomonas putida KT2440

Subject, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Klebsiella michiganensis M5al

 Score =  192 bits (487), Expect = 7e-54
 Identities = 103/241 (42%), Positives = 145/241 (60%), Gaps = 3/241 (1%)

Query: 1   MRLSRFFIDAPLSLGEH-DLPEAQAHYIGRVLRMAPGDAVQLFDGSGQEYRGQLLEVGKK 59
           MR+ R      ++ G    L +  A+++GRVLRM  G A++LFDGS Q +   ++E GKK
Sbjct: 1   MRIPRIHHPERITTGSQIALSDDAANHVGRVLRMGKGQAIELFDGSNQIFEAVIVEAGKK 60

Query: 60  TVRVSLDQAFAGQADSPLHVHLGQGLSRGERMDWAIQKATELGANEITPIVSERCEVRLK 119
            V V +  +     +SPLH+HLGQ +SRGE+M++ IQK+ ELG + ITP+ SERC V+L 
Sbjct: 61  NVLVEVQSSKVDNRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLD 120

Query: 120 DERADKRLAHWRQVAISACEQCGRSTLPVIHPPVTLAEWLSSTKADLKLVLHPVAEPLIS 179
            ER  K++  W+++AI+ACEQ GR+ +P I P + L  W +     LKL LHP A   I+
Sbjct: 121 AERLQKKIQQWQKIAIAACEQSGRNVVPEIRPAMQLEAWCAEQDEGLKLNLHPRASASIN 180

Query: 180 --HEKPATLAFVIGPEGGLSEAEVEQAKAAGFHAARLGPRVLRTETAPVVALSVAQQLWG 237
                   +  +IGPEGGLS  E+       F    LGPRVLRTET  + A++  Q  +G
Sbjct: 181 TLPLPVERIRLLIGPEGGLSAEEIAMTARYQFTDILLGPRVLRTETTALTAITALQVRFG 240

Query: 238 D 238
           D
Sbjct: 241 D 241