Pairwise Alignments

Query, 626 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

Subject, 443 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  389 bits (999), Expect = e-112
 Identities = 224/449 (49%), Positives = 279/449 (62%), Gaps = 18/449 (4%)

Query: 1   MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
           M+FA L L   L+ A++  GY  PTPVQ++AIPAVL G DLM AAQTGTGKT  FALP+L
Sbjct: 1   MTFADLDLVPPLLEALDVLGYQTPTPVQEKAIPAVLAGGDLMAAAQTGTGKTASFALPLL 60

Query: 61  ERLFPAGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLPLVSACIFGGVGMN 120
           +RL     P  S        R L+L PTRELA QV DSF  Y + L L S  ++GGV +N
Sbjct: 61  QRLAHDPEPTASN-----STRALILVPTRELAQQVCDSFVAYGQFLVLRSYAVYGGVSIN 115

Query: 121 PQIQAIAKGVDVLVACPGRLLDLAGQGKVDLAHVEILVLDEADRMLDMGFIHDVKKVLAR 180
           PQ+  + KGVD+LVA PGRLLDL  Q  V    V  LVLDEADRMLD+GF  ++  + A 
Sbjct: 116 PQMMKLRKGVDILVATPGRLLDLHRQNAVRFDQVRTLVLDEADRMLDLGFARELNALFAL 175

Query: 181 LPAKRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVERIEQRVYRLPASHKRALL 240
           LP +RQ LLFSATFS  I  +AD+LL  P  IE   PN T   I+Q V  +    K AL 
Sbjct: 176 LPKQRQTLLFSATFSDAIRSMADQLLKKPLSIETARPNATARGIKQWVVPVDKKRKSALF 235

Query: 241 AHLITLGAWEQVLVFTRTKHGANRLAEYLEKQGLTAAAIHGNKSQNARTKALADFKANSV 300
            HL     W+QVLVF +T+ G + L E L  +G+ A +IHG+K Q AR +AL  FKA  V
Sbjct: 236 CHLYKHKKWDQVLVFVKTRKGVDELVETLTAKGIAAESIHGDKPQPARLRALESFKAGQV 295

Query: 301 RVLVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDEEKL 360
           RVLVATD+A+RGLDID LP VVNF+LP V EDYVHRIGRT RAG SGEA+SLV  DE  L
Sbjct: 296 RVLVATDVASRGLDIDDLPRVVNFDLPIVPEDYVHRIGRTARAGASGEAVSLVCADEVNL 355

Query: 361 LKSIERVTKQRIADGDLMGFD----------ASQVEAEKPEARERPQ--NNGRGGRNQQA 408
           L +IE +  Q ++  +  GF+          A QV  +KP+  + P+  + G G    + 
Sbjct: 356 LGAIEVLIGQPLSRIEQHGFEPDHRVPETGPAGQV-IKKPKKPKMPKHLDYGIGSGPSRG 414

Query: 409 RGEGGKDTNGGRKDKGKDKGKARQQAAAK 437
           +G G     GGR+  G+  GKA  +A  +
Sbjct: 415 KGPGSAKAPGGRRGAGRPGGKAAPKARGR 443