Pairwise Alignments

Query, 626 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

Subject, 450 a.a., ATP-dependent RNA helicase RhlE from Klebsiella michiganensis M5al

 Score =  484 bits (1247), Expect = e-141
 Identities = 257/464 (55%), Positives = 322/464 (69%), Gaps = 15/464 (3%)

Query: 1   MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
           MSF SLGL+  ++RA+   GY +PTP+QQ+AIPAVLQGRDLM +AQTGTGKT GF LP+L
Sbjct: 1   MSFDSLGLNPEILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL 60

Query: 61  ERLFPAGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLPLVSACIFGGVGMN 120
           + L       +    G R  R L+LTPTRELAAQ+ ++ + Y++ L + S  +FGGV +N
Sbjct: 61  QHLVQK----EPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNVRSLVVFGGVSIN 116

Query: 121 PQIQAIAKGVDVLVACPGRLLDLAGQGKVDLAHVEILVLDEADRMLDMGFIHDVKKVLAR 180
           PQ+  +  GVD+LVA PGRLLDL  Q  V L  VE+LVLDEADRMLDMGFIHD+++VLA+
Sbjct: 117 PQMMKLRSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFIHDIRRVLAK 176

Query: 181 LPAKRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVERIEQRVYRLPASHKRALL 240
           LPAKRQNLLFSATFS +I  LA+KLLHNP  IEV   NT  E++ Q V+ +    KR LL
Sbjct: 177 LPAKRQNLLFSATFSDEIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKRELL 236

Query: 241 AHLITLGAWEQVLVFTRTKHGANRLAEYLEKQGLTAAAIHGNKSQNARTKALADFKANSV 300
           + +I  G W+QVLVFTRTKHGAN LAE L K G+ +AAIHGNKSQ ART+ALADFK+  +
Sbjct: 237 SQMIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGI 296

Query: 301 RVLVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDEEKL 360
           RVLVATDIAARGLDI++LPHVVN+ELPNV EDYVHRIGRTGRA  +GEA+SLV  DE KL
Sbjct: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356

Query: 361 LKSIERVTKQRIADGDLMGFDASQVEAEKPEARERPQNNGRGGRNQQARGEGGKDTNGGR 420
           L  IER+ K+ I    L G++       +P    R Q  G GGR  Q++G G        
Sbjct: 357 LHDIERLLKKEIPRIALAGYEPDPSIKAEPIQNGRQQQRGGGGRGGQSQGRG-------- 408

Query: 421 KDKGKDKGKARQQAAAKPDDKEKSGDKQQPRKPRDKKSRPQQAS 464
              G+ +G+ +Q A  + D +      Q  + PR ++ R   A+
Sbjct: 409 ---GQGQGRGQQSAPRRTDGEAPKARTQDGKPPRRRRPRKPAAA 449