Pairwise Alignments

Query, 262 a.a., putative Periplasmic binding protein from Pseudomonas putida KT2440

Subject, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 84.3 bits (207), Expect = 2e-21
 Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 20/231 (8%)

Query: 10  ILLLVCLSPLALGERLRLVTDDWAPYVFQHNGQPRGIDYEVASQVFARLGVEVEWQFLPW 69
           ++ +V  S  A  + +    D W P+V + N Q +G+  ++ +  FA  G  VE+  +PW
Sbjct: 8   LISVVLCSFSAWAQTITAAQDPWPPFVME-NAQQKGLSVDIVTAAFATQGYTVEFTIMPW 66

Query: 70  KRCLAMAEQGLADGILDIFQTDARQPYMVYGAEPMS-EVEFVLFQSRSRRHAVTHLDDLA 128
            R L   ++G  D +   + T  R  Y+ Y    ++ +V+F+  +          L  L 
Sbjct: 67  SRALNDVKEGKIDILPATWFTQERTAYLTYSDNYLTNQVKFI--KKAGDNFEFAGLASLN 124

Query: 129 GLTVGTSPGYAYGKGFTEAPHFKREAAPTQEANFGKLILGRIDLVITDRRVGHYLLRQLG 188
           G  VG   GY YG  F   P F R  +   + N  KL  GRIDL + D  V   ++ + G
Sbjct: 125 GKKVGIVRGYGYGDEFMNDPSFFRPESTDLKQNLQKLQAGRIDLAVEDELVAKSIITEAG 184

Query: 189 L--------QQQVEELPL-VISRQAQYLGLVRKPGREALAVAFAEELQRFK 230
           +         Q + E PL V S +A        P  E L  AF + L   K
Sbjct: 185 MNLADFAFTNQAISENPLHVTSGKA-------NPRSEELVAAFNKGLAEIK 228