Pairwise Alignments

Query, 277 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 301 a.a., multidrug transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 93.6 bits (231), Expect = 5e-24
 Identities = 88/292 (30%), Positives = 141/292 (48%), Gaps = 25/292 (8%)

Query: 6   LVLVAALLHATWNTLIK---FSGERLLVIASMDTVALAFAVLAVPFVDVP----PAEIWP 58
           LVL +ALLHA WN + K    SG    + A+  T  L    +   F  +     P + W 
Sbjct: 8   LVLFSALLHAGWNIIGKRYQSSGPSFFLGATSATSLLLTPYIVWYFTKIGWSTLPTQFWL 67

Query: 59  WLVASALAEQLYRYLLIKAYRVGDLGLVYPLMRGLSPLVVLGLTLAFAGESLSQQQIIGI 118
            LV S L++ +Y   L  AY   D+G+ YPL RGL P++++G      G  L   Q +G 
Sbjct: 68  LLVVSGLSQMVYMLGLAFAYSKVDIGIAYPLARGL-PVLLVGAGTVMLGYDLQLNQWLGF 126

Query: 119 LLIPCGMACLLWQGGGGDRL-PWSMLPVVALIGLCIGC--YTWFDGQAVRLWGK------ 169
            LI  G   +  Q     R   ++ L +V  +   +G   Y+  D +A+ +  +      
Sbjct: 127 ALITLGCLMIPLQKFRQFRFADYANLGIVWALVAALGTAGYSIIDKEALAIIEQTVGSQM 186

Query: 170 PWDYLVWLTL-LSAWQFPLLASV-----ARRAPFVLFWRTQWRLGLAVGFCVLFSYALVL 223
           P  Y   L L +  W   +  ++      +RAPFV  WR ++   LA G  +  +Y+LVL
Sbjct: 187 PASYSAVLYLGIQFWAMCIPLAIWYLLTGQRAPFVEAWRIRYTATLA-GLMMGGTYSLVL 245

Query: 224 WAMHL-GSVAEAAALRELSVILVVLLGMRYLKEPFGGPRLLACGLVLAGMLV 274
           +AM L  +V+   ALR+ S++  + +G+ +L E +   RLL    ++AG++V
Sbjct: 246 YAMTLTENVSFIVALRQTSIVFGLFMGIAFLGERWYVTRLLGVSAIVAGLVV 297