Pairwise Alignments

Query, 277 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 299 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score =  109 bits (272), Expect = 8e-29
 Identities = 93/294 (31%), Positives = 141/294 (47%), Gaps = 32/294 (10%)

Query: 3   ATSLVLVAALLHATWNTLIK--FSGERLLVIASMDTVALAFAVLAVPFVDVPP----AEI 56
           A  LV++AA++HA+WN L K   S     V A   T  LA+A  A+  +        A +
Sbjct: 14  ALVLVVLAAVIHASWNLLSKRAASAGPTFVFAYTFTACLAYAPWALWLIAQGAVAWSASV 73

Query: 57  WPWLVASALAEQLYRYLLIKAYRVGDLGLVYPLMRGLSPLVVLGLTLAFAGESLSQQQII 116
              L+ S +    Y   L + Y+V DL +VYP+ RG  PL+ +   + F GE  S + + 
Sbjct: 74  VGCLLISGIVHLGYSLCLQRGYQVADLSVVYPVARGTGPLLAVLAAIVFLGEQPSLRGVF 133

Query: 117 GILLIPCGMACLLWQG--------GGGDRLPWSMLPVVALIGLCIGCYTWFDGQAVRLWG 168
           G++ +  G+A +  QG        GG   + W +       G  I  YT  D   V   G
Sbjct: 134 GLIAVVGGIALISTQGRLAAFRKPGGSSGVLWGL-----ATGGLIASYTVVDAYGVMTLG 188

Query: 169 KPWDYLVW------LTLLSAWQFPLLASVARRAPFVLFWRTQWRLGLAVGFCVLFSYALV 222
                L W      + LL+    PL+A+  RRA   +    +W L + VG     SY LV
Sbjct: 189 IAPVVLDWFANGARVVLLA----PLIAANPRRAREAM--AGKWPLAIGVGLLSPLSYILV 242

Query: 223 LWAMHLGS-VAEAAALRELSVILVVLLGMRYLKEPFGGPRLLACGLVLAGMLVM 275
           L A+ +G+ ++ AA LRE+S+++  LLGM  LKE  G  R   C ++L G++ +
Sbjct: 243 LAALDIGAPLSIAAPLREMSMMVGALLGMVLLKERVGAWRFGGCAVLLCGVVAL 296