Pairwise Alignments

Query, 708 a.a., diguanylate cyclase from Pseudomonas putida KT2440

Subject, 642 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  312 bits (800), Expect = 3e-89
 Identities = 203/570 (35%), Positives = 308/570 (54%), Gaps = 12/570 (2%)

Query: 132 LLDQQRNRRMLQQLSRE--LETARAFNASILENAAEGILVVDAHGIIRFANPAISRLLAA 189
           LL +Q  RR  +Q   +   ET+    A++ ++  EG+LV D    I   NPA SR+   
Sbjct: 56  LLGRQHFRRFDEQQRAQHVQETSLKQAAAVFDSTQEGVLVTDPRQRIVHVNPAFSRITGY 115

Query: 190 PVQHLQG-TQLLDVVQLTSTSLWRESDFYKAYQGRQIYRVHDAQLRTQGGELVPV--ALS 246
             + + G T  L          +++       +G     + +   R + GE+ P    L 
Sbjct: 116 STEEVLGQTPKLFASGKHDAEFYQQMWLALKDKGEWSGEIWN---RRKNGEVYPQWQNLR 172

Query: 247 CAPLPADQQAMVVTVL-DMSAVRNLHQQLEYQAITDPLTGLLNRRGFYQAAEGALLRNER 305
           C      Q +  V V  D+SA++   ++L+  A  DPL  L NR  F + A+  L R   
Sbjct: 173 CIHDNQGQLSHYVAVFSDLSALKRSREELDQLAHYDPLVNLPNRLLFTERAKQDLERARA 232

Query: 306 SDKAQALMYMDLDGFKRINDSLGHDAGDRVLRWVAEQLKDCLGSEALLARMGGDEFTALF 365
             ++ AL+ +DLD FK IN+SLGH  GD +L+ V+ +L + L     L R+GGDEF  L 
Sbjct: 233 HKRSGALLLIDLDHFKDINESLGHSLGDALLQAVSTRLSEHLEKGMTLGRLGGDEFALLC 292

Query: 366 DSLPYPEQAGRFAERLLERVSISHEVDGLDVCLGVSIGIATYP--DCGANVEGLLRSADA 423
           +     E+A   A R+L+R++ S  +   ++    SIGI  YP      N E L+R+AD+
Sbjct: 293 EGYG-AEKATALALRILDRLNESFHIGDQELFSSASIGIVLYPYPTDVQNAEQLMRNADS 351

Query: 424 AMYAAKQAGRQQYRFYDQELNGRARSRLMLEDSVRMAIEQQDFTLVYQPQVAFHDGRLRG 483
           A++ AK +GR  Y FY +EL  +AR R+ L  ++R A+EQ    L YQP      G + G
Sbjct: 352 ALFKAKSSGRSTYAFYSEELTSQARQRVELVTALRQALEQGQLRLHYQPIYDLRQGTISG 411

Query: 484 FEALLRWQHPSVGDVPPGLFIPLLEEARLINRLASWIYRQGAAQRQAWYDRFPPDLVLGI 543
           FEAL+RWQHP  G + PG+FIP+ EE  LI+ +  W+  Q   Q + W  +  P   + +
Sbjct: 412 FEALVRWQHPEKGLIAPGVFIPIAEETGLISAIDHWVLEQACNQAREWLGQGHPLGFIAV 471

Query: 544 SLSRAQFVMPGLVEELQRVIQLYQLVPTQLEVEVAETSLMYNIDAAVKQIHRLRELGVRV 603
           ++S   F    L  ++  ++    L    LE+E+ E+++M + DAA++ + RLR LGV++
Sbjct: 472 NISSRLFGNGELDLQVATILARSGLEARHLELEITESAVMQDPDAALELLQRLRALGVQL 531

Query: 604 ALDDFGAGDCSLRMLRDLPIDTLKLDRHLVARLPDSTVDAALVRSVIGLCADYRITVIAE 663
           A+DDFG G  SL+ L+ + +  LK+D+  V  LPD   DAA+ RSVIGL  +  + V+AE
Sbjct: 532 AIDDFGTGYSSLQRLKRMNVHKLKIDQGFVRGLPDDRDDAAITRSVIGLAHNLGLKVVAE 591

Query: 664 GVETPAQAAWLKANGCEYVQGFLVAYPMTA 693
           G+ET  QAA+L A  C+Y QG+  A P  A
Sbjct: 592 GIETAEQAAFLLAQNCDYGQGYGFARPQPA 621