Pairwise Alignments

Query, 708 a.a., diguanylate cyclase from Pseudomonas putida KT2440

Subject, 1301 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

 Score =  299 bits (766), Expect = 5e-85
 Identities = 194/560 (34%), Positives = 297/560 (53%), Gaps = 18/560 (3%)

Query: 144  QLSRELETARAFNASILENAAEGILVVDAHGIIRFANPAISRLLAAPVQHLQG--TQLLD 201
            Q  +E E      +++  N+ EGI V D  G I   NPA S++       + G   ++L 
Sbjct: 740  QSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAAEVLGRNARILQ 799

Query: 202  VVQLTS---TSLWRESDFYKAYQGRQIYRVHDAQLRTQGGELVPVALSCAPLPADQQAMV 258
              +       +LW++     +++G +I+       R + GE+ P  LS + +  + Q  V
Sbjct: 800  SGRQNREFYVALWQDVLTIGSWRG-EIWN------RRRDGEVFPEWLSISSV-RNHQGEV 851

Query: 259  VTVL----DMSAVRNLHQQLEYQAITDPLTGLLNRRGFYQAAEGALLRNERSDKAQALMY 314
               +    D+S +++   +  + A  DPLTGL NR       + A+ R  R+    A+++
Sbjct: 852  TNYIGIFSDLSRIKHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHAIERARRTGGRCAVLF 911

Query: 315  MDLDGFKRINDSLGHDAGDRVLRWVAEQLKDCLGSEALLARMGGDEFTALFDSLPYPEQA 374
            +DLD FK INDSLGH AGD +LR +  +L  CLG    LAR+GGDEF A+ + +      
Sbjct: 912  LDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVAVIEDIDGIPAV 971

Query: 375  GRFAERLLERVSISHEV-DGLDVCLGVSIGIATYPDCGANVEGLLRSADAAMYAAKQAGR 433
            G  A  +LER+     + +G +VC+G S+GI+ +P+ G N + LL+ AD A+   K AG 
Sbjct: 972  GTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHADTALGQVKGAGG 1031

Query: 434  QQYRFYDQELNGRARSRLMLEDSVRMAIEQQDFTLVYQPQVAFHDGRLRGFEALLRWQHP 493
              Y FY + L  R  +RL LE  +R A+EQ DF L YQP +A   G + G EAL+RW   
Sbjct: 1032 GAYGFYTRTLTERISARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVEGVEALVRWAGG 1091

Query: 494  SVGDVPPGLFIPLLEEARLINRLASWIYRQGAAQRQAWYDRFPPDLVLGISLSRAQFVMP 553
                +PP  FIPL E+  LI  L  W+  +     Q W  +  P  VL ++LS  QF   
Sbjct: 1092 DGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQRWRSQGMPLTVLAVNLSPRQFRDH 1151

Query: 554  GLVEELQRVIQLYQLVPTQLEVEVAETSLMYNIDAAVKQIHRLRELGVRVALDDFGAGDC 613
             +   ++RV++   L  + LE+E+ E+++M    AA  Q+  L+ LGVR+A+DDFG G  
Sbjct: 1152 AIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGVRLAIDDFGTGYS 1211

Query: 614  SLRMLRDLPIDTLKLDRHLVARLPDSTVDAALVRSVIGLCADYRITVIAEGVETPAQAAW 673
            SL  LR  PID +K+D+  V  +P       +  ++I +    ++ V+AEGVET  Q  +
Sbjct: 1212 SLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLAEGVETTDQLDF 1271

Query: 674  LKANGCEYVQGFLVAYPMTA 693
            L    C+  QG+L + P+TA
Sbjct: 1272 LSRKQCDSAQGYLFSRPITA 1291



 Score = 68.2 bits (165), Expect = 3e-15
 Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 12/189 (6%)

Query: 16  VLLVVDDYPENLISMRALLARQDWQVLTASSGIEALSALLEYEVDLVLMDVQMPEMDGFE 75
           ++LVV+D P+    +  ++A   ++V++A  G E L    E   DL++ DV MP M G  
Sbjct: 497 LVLVVEDNPDMNAFVSEIVAGH-YRVISAFDGQEGLEKAHETLPDLIISDVMMPRMSGET 555

Query: 76  VARLMRGNQRTRLTPIIFLT--ANEKSEAAVLKGYASGAVDYMFKPFDPQILKPKVQALL 133
           +A  +R +  T   PII LT  A+E   A +L+G      DY+FKPF    L  +   L+
Sbjct: 556 MADTLRQDGLTSDIPIIMLTAKADEAMRARMLRGVVQ---DYLFKPFSRLELLARADGLI 612

Query: 134 DQQRNRRMLQQLSRELETARAFNASILENAAEGILVVDAHGIIRFANPAISRLLAAPVQH 193
              R ++M+ +     E+   F A+  E AA GI  +D  G     N  +  ++  P   
Sbjct: 613 ADHRRKQMVLR-----ESEARFRAT-FEQAAVGIAHLDPDGHWLRVNHKLCDIVGYPPDE 666

Query: 194 LQGTQLLDV 202
           L      D+
Sbjct: 667 LLTLSFQDI 675