Pairwise Alignments

Query, 708 a.a., diguanylate cyclase from Pseudomonas putida KT2440

Subject, 837 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  290 bits (742), Expect = 2e-82
 Identities = 192/580 (33%), Positives = 296/580 (51%), Gaps = 20/580 (3%)

Query: 129 VQALLDQQRNRRMLQQLSRELETARAFNASILENAAEGILVVDAHGIIRFANPAISRLLA 188
           ++ ++   RN    +    +LE A    A+I EN+ EG+++ DA G I   + A + +  
Sbjct: 267 LEGVIGISRNITSHKAAQEQLELA----ANIFENSVEGVVITDASGNIIEVHGAFTEITG 322

Query: 189 APVQHLQGT--QLLDVVQLTST---SLWRESDFYKAYQGRQIYRVHDAQLRTQGGELVPV 243
                + G   ++L+  +        LWR       + G +I+       R + G + P 
Sbjct: 323 YSRDEVLGENPRILNSGRHDKAFFERLWRSLLTNGKWHG-EIWN------RRKSGAIYPE 375

Query: 244 ALSCAPLPADQQAM---VVTVLDMSAVRNLHQQLEYQAITDPLTGLLNRRGFYQAAEGAL 300
            L+ + +  D   +   V    D+SA +   ++L      DPLT L NR       E  L
Sbjct: 376 QLTISSMYGDDHQVRYFVAVFADISAQKQSEKELARLVYHDPLTKLPNRMMLSANLEQEL 435

Query: 301 LRNERSDKAQALMYMDLDGFKRINDSLGHDAGDRVLRWVAEQLKDCLGSEALLARMGGDE 360
               R +   AL+++D+D FK INDS GH  GD +L  VA +L   LG EA LAR+G DE
Sbjct: 436 RHAAREETELALIFIDVDLFKHINDSYGHVTGDAILVEVARRLGQKLGEEATLARLGSDE 495

Query: 361 FTALFDSLPYPEQAGRFAERLLERVSISHEVDGL-DVCLGVSIGIATYPDCGANVEGLLR 419
           F A+   +   +       RL E       +D    V L  S+G+A YP  G + + LLR
Sbjct: 496 FIAVLPHVESDDSVSLMVSRLREAFDAPFLLDDEGSVRLTASMGVAIYPGDGESGDTLLR 555

Query: 420 SADAAMYAAKQAGRQQYRFYDQELNGRARSRLMLEDSVRMAIEQQDFTLVYQPQVAFHDG 479
           +AD AM+ AK  GR  Y FY Q L   +   L L+ ++  AI +  F LVYQP++A   G
Sbjct: 556 NADTAMHRAKANGRNNYAFYTQSLTLASVEHLKLQSALHDAINKDAFYLVYQPKLALGTG 615

Query: 480 RLRGFEALLRWQHPSVGDVPPGLFIPLLEEARLINRLASWIYRQGAAQRQAWYDRFPPDL 539
           +  GFEALLRW+ P +G + P +FIP+ E   LIN +  W+ +Q A Q   W        
Sbjct: 616 QCVGFEALLRWEDPQLGTISPAIFIPVAENIGLINEIGLWVLKQAATQGAQWLAEGKRFG 675

Query: 540 VLGISLSRAQFVMPGLVEELQRVIQLYQLVPTQLEVEVAETSLMYNIDAAVKQIHRLREL 599
            + ++++  Q        +++RV+    L P  LE+EV E+ +M +  A ++ + +L EL
Sbjct: 676 RISVNVAGPQLQQKQFCAQVKRVLDEAGLPPEYLELEVTESCMMSDPLAVIEVLKQLGEL 735

Query: 600 GVRVALDDFGAGDCSLRMLRDLPIDTLKLDRHLVARLPDSTVDAALVRSVIGLCADYRIT 659
           GV +++DDFG G  SL  L+ LPI  LK+D+  +  +P    + A+ ++VI L     + 
Sbjct: 736 GVELSVDDFGTGYSSLNYLKRLPIHKLKIDQSFIRDIPRDGNNTAIAKAVIALGHALNLC 795

Query: 660 VIAEGVETPAQAAWLKANGCEYVQGFLVAYPMTATDASGF 699
           +IAEGVETP QAA+L+A GC+  QG+L + P    + + F
Sbjct: 796 IIAEGVETPEQAAFLEAAGCDQAQGYLYSKPRMVEELAEF 835