Pairwise Alignments

Query, 708 a.a., diguanylate cyclase from Pseudomonas putida KT2440

Subject, 879 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  369 bits (947), Expect = e-106
 Identities = 250/708 (35%), Positives = 372/708 (52%), Gaps = 32/708 (4%)

Query: 17  LLVVDDYPENLISMRALLARQDWQVLTASSGIEALSALLEYEV-DLVLMDVQMPEMDGFE 75
           +LVVDD  ENL  +  LL    + V  A+SG  AL       V DL+L+D+ MPEMDG+E
Sbjct: 19  VLVVDDTKENLTVIGELL-NPHYNVRIANSGQRALKVANSTPVPDLILLDIMMPEMDGYE 77

Query: 76  VARLMRGNQRTRLTPIIFLTANEKSEAAVLKGYASGAVDYMFKPFDPQILKPKVQALLD- 134
               +R N  TR  P+IF+TA +  E    +G A GAVDY+ KP  P IL  +++  LD 
Sbjct: 78  TLAELRANPATRHIPVIFVTALDADEDEE-RGLALGAVDYIAKPIRPAILLGRIRTQLDL 136

Query: 135 ---QQRNRRMLQQLSRELETARAFNASI------------------LENAAEGILVVDAH 173
              Q + RR    L  E++   A N +I                  L +A+EGI  VD  
Sbjct: 137 KLAQDQLRRQNASLEAEVQRRVAENLAIQEQGQRNEARLNRMRQLILSSASEGIFGVDVE 196

Query: 174 GIIRFANPAISRLLAAPVQHLQGTQLLDVVQLT----STSLWRESDFYKAYQGRQIYRVH 229
           G I F NPA + LL    + L G     ++  +    S     +   +         R  
Sbjct: 197 GRINFINPAATALLGYTEEELLGQDSHRMLHHSHIDGSHYAVEDCPMHLCLHSGITIRDR 256

Query: 230 DAQLRTQGGELVPVALSCAPLPADQQAM--VVTVLDMSAVRNLHQQLEYQAITDPLTGLL 287
           ++ L  + G  +P+  S  P+  D + +  V T+ D+   +   +QLE  +  D LT L 
Sbjct: 257 ESTLWHRDGTPLPLECSHTPIVEDGRIIGAVTTLRDIRDRKRYLEQLERHSNYDELTDLP 316

Query: 288 NRRGFYQAAEGALLRNERSDKAQALMYMDLDGFKRINDSLGHDAGDRVLRWVAEQLKDCL 347
           NR   Y      +    RS    A++ ++LD FK IND+LG  AGD+VLR VA++L   +
Sbjct: 317 NRNLLYDRLNHNIEVCRRSGMNIAVLTLNLDRFKSINDTLGRAAGDQVLREVAQRLGRQV 376

Query: 348 GSEALLARMGGDEFTALFDSLPYPEQAGRFAERLLERVSISHEVDGLDVCLGVSIGIATY 407
                LAR+ GDEF  + + +   EQ+  FA+ +L+ ++    V   +  L  SIGIAT+
Sbjct: 377 RKMDTLARLEGDEFVLVVE-VATAEQSSAFAQPILKALANPFHVAEREFFLSGSIGIATF 435

Query: 408 PDCGANVEGLLRSADAAMYAAKQAGRQQYRFYDQELNGRARSRLMLEDSVRMAIEQQDFT 467
           P  G N E LLR+ADAAMY AK  G  +++FY  E+N R+  RL LE+ +R AI+Q +  
Sbjct: 436 PKDGDNGEELLRNADAAMYKAKTKGGNRFQFYTAEMNQRSLERLDLENGLRRAIDQGELV 495

Query: 468 LVYQPQVAFHDGRLRGFEALLRWQHPSVGDVPPGLFIPLLEEARLINRLASWIYRQGAAQ 527
           + YQPQV   +G + G EAL+RWQ P  G V PG FI L EE  LI  L  W+ R   +Q
Sbjct: 496 VYYQPQVNLRNGAIIGAEALVRWQDPEKGLVMPGSFIALAEETGLIVPLGEWVLRTACSQ 555

Query: 528 RQAWYDRFPPDLVLGISLSRAQFVMPGLVEELQRVIQLYQLVPTQLEVEVAETSLMYNID 587
            +AW D   P + + ++LS  QF    +VE   R++    L P  LE+E+ E+++M + +
Sbjct: 556 NKAWQDAGLPKIPVAVNLSARQFAAQDVVELAARILHDTGLAPNYLELELTESAVMADAE 615

Query: 588 AAVKQIHRLRELGVRVALDDFGAGDCSLRMLRDLPIDTLKLDRHLVARLPDSTVDAALVR 647
           A ++   +L+ L + +++DDFG G  SL  L+   ID LK+D+  V  +      A++  
Sbjct: 616 AFIRATEKLKGLSIALSIDDFGTGFSSLSYLKRFAIDRLKIDQTFVRDITHDPDSASIAL 675

Query: 648 SVIGLCADYRITVIAEGVETPAQAAWLKANGCEYVQGFLVAYPMTATD 695
           ++I L    ++  IAEGVET AQ  +L+A  C+ +QG+  +  + A +
Sbjct: 676 AIISLAHSLKLLAIAEGVETEAQLNFLRARNCDEMQGYFFSPALPADE 723



 Score = 54.3 bits (129), Expect = 3e-11
 Identities = 26/59 (44%), Positives = 40/59 (67%)

Query: 17  LLVVDDYPENLISMRALLARQDWQVLTASSGIEALSALLEYEVDLVLMDVQMPEMDGFE 75
           LL+VDD P  L +++ L  R+ + +LTA+SG E L  L  ++V +++ D +MPEMDG E
Sbjct: 747 LLLVDDEPGILSALKRLFRREGYVILTANSGKEGLDILAGHDVGVIISDARMPEMDGAE 805