Pairwise Alignments

Query, 708 a.a., diguanylate cyclase from Pseudomonas putida KT2440

Subject, 986 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  309 bits (791), Expect = 5e-88
 Identities = 202/575 (35%), Positives = 312/575 (54%), Gaps = 36/575 (6%)

Query: 145 LSRE-LETARAFNASILENAAEGILVVDAHGIIRFANPAISRLLAA----PVQHLQGTQL 199
           L RE L  + A    +L+     I ++DA GII   N   SR  A     P     G   
Sbjct: 143 LQREALRASEAVQKGVLDALPAHIAILDAEGIIVAVNEPWSRFAAENSHDPSSAGVGCNY 202

Query: 200 LDVVQLTSTSLWRES---------DFYKAYQGRQ-----IYRVHDAQLRTQGGELVPVAL 245
           + V + +    W ES                G Q     +Y  H    +     LV    
Sbjct: 203 IRVCERS----WGESAEEAQDIAVGIRAVIDGLQHEFSLVYACHSPTEKRWFRVLV---- 254

Query: 246 SCAPLPA-DQQAMVVTVLDMSAVRNLHQQLEYQAITDPLTGLLNRRGFYQAAEGALLRNE 304
              PL A   +  VV  L+++      Q+L + A  D LTGL NR  F +  + AL   +
Sbjct: 255 --TPLEARGNRGAVVMHLNVTETVEAQQRLTHLAHFDSLTGLPNRLLFRERLKAALAMVQ 312

Query: 305 RSDKAQALMYMDLDGFKRINDSLGHDAGDRVLRWVAEQLKDCLGSEALLARMGGDEFTAL 364
           R     A+M++DLD FK +ND+LGH AGD +L+ VA ++  CL +   + R+GGDEF  L
Sbjct: 313 RQGGRLAVMFIDLDRFKVVNDTLGHLAGDALLQQVAARIGGCLRASDTVGRLGGDEFAVL 372

Query: 365 FDSLPYPEQ---AGRFAERLLERVSISHEVDGLDVCLGVSIGIATYPDCGANVEGLLRSA 421
              +P PE+       A RL++ ++    ++G ++ +  SIGI  YPD   ++E L+R+A
Sbjct: 373 ---VPDPEREYDVTVVARRLVDTLAQPITLEGQELFVSASIGITLYPDDCDDLEKLIRNA 429

Query: 422 DAAMYAAKQAGRQQYRFYDQELNGRARSRLMLEDSVRMAIEQQDFTLVYQPQVAFHDGRL 481
           D AMY AK+ GR  ++F+   +N R + +L LE  +R A+++Q+F L +QP+V+   G +
Sbjct: 430 DTAMYRAKELGRNNFQFFTAAMNARVKEQLQLETDLRRAVQRQEFILHFQPKVSCSHGGI 489

Query: 482 RGFEALLRWQHPSVGDVPPGLFIPLLEEARLINRLASWIYRQGAAQRQAWYDRFPPDLVL 541
            GFEALLRWQHP  G V P  FIPLLEE  LI  + +W+ +Q   Q  AW+      L +
Sbjct: 490 TGFEALLRWQHPVRGLVSPMEFIPLLEETGLIVPVGTWVLQQACQQAAAWHLAGHGQLTV 549

Query: 542 GISLSRAQFVMPGLVEELQRVIQLYQLVPTQLEVEVAETSLMYNIDAAVKQIHRLRELGV 601
            ++LS  Q     LV+++++ ++   L P  LE+E+ E+ LM +++  +  ++RL+ +GV
Sbjct: 550 AVNLSARQLQSEALVQDVRQALEDSGLPPQALELELTESLLMSHVEDNIALLNRLKAMGV 609

Query: 602 RVALDDFGAGDCSLRMLRDLPIDTLKLDRHLVARLPDSTVDAALVRSVIGLCADYRITVI 661
           ++++DDFG G  SL  L+ LP+DT+K+DR  V  +     DA++ R+VI +  + R+ V+
Sbjct: 610 QLSVDDFGTGYSSLAYLKRLPLDTVKVDRAFVQDITADPGDASITRAVITMAHNLRLKVV 669

Query: 662 AEGVETPAQAAWLKANGCEYVQGFLVAYPMTATDA 696
           AEGVET  Q A L AN C+ +QG+  + P+ A +A
Sbjct: 670 AEGVETEGQIALLVANHCDEMQGYYFSRPVPAPEA 704



 Score = 40.0 bits (92), Expect = 6e-07
 Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 30/201 (14%)

Query: 17  LLVVDDYPENLISMRALLARQDWQVLTASSGIEALSALLEYEVDLVLMDVQMPEMDGFEV 76
           +L+V   P   +++   L   + +VL A  G E L+AL    VD ++ D  + +  G   
Sbjct: 728 VLLVLTAPALRLTLGRALEEANLRVLLAGGGEEGLAALACQRVDAIVADAGLTDSAG--Q 785

Query: 77  ARLMRGNQRTRLTPIIFLTANEKSEAAVLKGYASGAVDYMFKPFDPQILKPKVQALLDQQ 136
           A L R  Q       + L++ +   AA  +     A   + +    ++L   V   L Q 
Sbjct: 786 AFLERAGQLQPEAGFLLLSSADNMAAAAAELPPHLAGHLLSRDVGTEVLVAGVLEALRQH 845

Query: 137 ----RNRRMLQQ----------LSRELETARAFNA--------------SILENAAEGIL 168
                N+R+ Q+          L +ELE+  A +A               +L+     +L
Sbjct: 846 SLLLENQRLTQEVHSAGLELSRLGQELESLLASHARQEIRPQQATGIAHEVLQELPAAVL 905

Query: 169 VVDAHGIIRFANPAISRLLAA 189
            VDA G++ +AN A  RL  A
Sbjct: 906 GVDASGMVAYANAAAERLWPA 926