Pairwise Alignments

Query, 461 a.a., ATP-dependent RNA helicase, specific for 23S rRNA from Pseudomonas putida KT2440

Subject, 476 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  519 bits (1336), Expect = e-152
 Identities = 266/460 (57%), Positives = 340/460 (73%), Gaps = 2/460 (0%)

Query: 2   TTESTAFATLPLSTAMLANLEALGYASMTPIQAQSLPVILKGQDLIAQAKTGSGKTAAFG 61
           T    +FA+LPLS  +LA LE L Y SMT IQA SLP+ L G DLIAQ KTGSGKTAAFG
Sbjct: 17  TPADLSFASLPLSAGLLATLEQLEYRSMTAIQAASLPLALAGHDLIAQGKTGSGKTAAFG 76

Query: 62  IGLLNPINPRYFGCQALVLCPTRELADQVAKELRRLARAEDNIKILTLCGGVSLGPQIAS 121
           + LL+ ++PR    QALVLCPTREL++QV +ELRRLAR E+N++ILTLCGG  + PQI S
Sbjct: 77  LTLLSRLDPRRLEIQALVLCPTRELSEQVTQELRRLARGEENVRILTLCGGSPMKPQITS 136

Query: 122 LEHGAHIIVGTPGRIQQHLDKGTLVLDGLNTLVLDEADRMLDMGFFDAIASIIGKTPSRR 181
           LE+GAHI+VGTPGR+  HL++G+L L  LNTLVLDEADRMLDMGF DAIA +  + P+ R
Sbjct: 137 LENGAHIVVGTPGRLMDHLERGSLTLAALNTLVLDEADRMLDMGFHDAIAWVARRCPAER 196

Query: 182 QTLLFSATYPAGIKQLAADFMRNPQQVKVESLHTDNQIEQRFIEIDPQQRLEAVTRVLGH 241
           QTLLFSATYP GI +LA  F+R P++VK+   H  ++I QRF E+  ++RL+AV  +L H
Sbjct: 197 QTLLFSATYPPGIAELAQRFLRQPKEVKLAEQHEGSKIRQRFYEVKHEERLQAVCTLLKH 256

Query: 242 YRPQSCVAFCFTKQQCEDVVAHLTAKGIVAQALHGDLEQRDRDQVLTMFANRSSSVLVAT 301
           YRP S +AFC TKQQC D+V  L  +G  A  L+GDLEQR+RDQVL  FANRS SVLVAT
Sbjct: 257 YRPASTLAFCNTKQQCRDLVQVLHGQGFSALTLNGDLEQRERDQVLIQFANRSCSVLVAT 316

Query: 302 DVAARGLDIDGLDMVINVELARDAEIHVHRVGRTGRAGEKGVAVSLVAPAEGHRAQAIEA 361
           DVAARGLDI  L+ VINV++  D EI++HR+GRTGR  E G A+SL +P +  R + I  
Sbjct: 317 DVAARGLDIAQLEAVINVDVTPDPEIYIHRIGRTGRGDEDGWALSLCSPRDRRRVETIAQ 376

Query: 362 LQNSPLRWDQLDSLKNKGGEPLLPVMTTLCIAAGRKDKLRPGDILGALTGDAGIPGKQVG 421
           +    L W  L SL++    PL+P M TL +  GRKDKLRPGD+LGALTG+AG   +QVG
Sbjct: 377 MMGMELEWHTLGSLQSGNEAPLVPPMATLLLLGGRKDKLRPGDVLGALTGEAGFAKEQVG 436

Query: 422 KIAIFDFQAFVAVERALAKQAMQRLNSGKIKGRALKVRII 461
           KI + +   +VAV R +A++A+++L   K+KG+++K R++
Sbjct: 437 KITVTEQVTYVAVARNIAREAVRKL--AKVKGKSVKTRLL 474