Pairwise Alignments

Query, 475 a.a., Drug resistance transporter, EmrB/QacA family from Pseudomonas putida KT2440

Subject, 491 a.a., DHA2 family efflux MFS transporter permease subunit from Rahnella sp. WP5

 Score =  425 bits (1092), Expect = e-123
 Identities = 219/463 (47%), Positives = 310/463 (66%), Gaps = 3/463 (0%)

Query: 5   TPLDPVTARWIPWVVAIAFFMQSLDGTILNTALPAMARSLAEDPLRMQGVIIAYMLTVAL 64
           TPL P + RW  W+VA  FFMQ+LD TI+NTALP+MARSL E+PL M  VI+AY+LTVA+
Sbjct: 13  TPLPP-SVRWQLWIVAFGFFMQALDTTIVNTALPSMARSLGENPLHMHSVIVAYVLTVAV 71

Query: 65  LIPASGWIADRFGTKRIFFSAILLFSFGSLLCAAANSLGFLIFARVVQGLGGALMLPVGR 124
           ++PASGW+AD+ G K +FFSAI+LF+ GSLLCA + SL  L+ +R+VQG+GGA+M+PVGR
Sbjct: 72  MLPASGWLADKVGVKWVFFSAIVLFTLGSLLCAQSESLRELVMSRIVQGIGGAMMVPVGR 131

Query: 125 LVVLRAYPRSELVRIMSFITIPGLLGPLLGPTVGGWLVEILSWHWIFLLNLPVGLLGCIA 184
           L VL+  PRSE +  M+ +T+PG +GPLLGP +GG+LV+  SWHWIFL+NLPVGL GCIA
Sbjct: 132 LTVLKIVPRSEYMAAMTMVTLPGQVGPLLGPALGGFLVQYASWHWIFLINLPVGLAGCIA 191

Query: 185 VWKFIPDLRGAERTTFDGPGFLLFGAAMVLITIAMEGLGELHLPHLRVMLLLFAGMACLA 244
               +P+ +   R  FD  GF++    M  +T+A+EG   + L  L ++LL+ AG   L 
Sbjct: 192 TLMIMPNYKMQTR-RFDISGFVMLAVCMATLTLALEGSRSMGLTALEIVLLVVAGGGALG 250

Query: 245 AYWLRAGRDPEPLFSPSLFRVRTFAIGILGNLFARLGSGALPFLVPLLLQVALGYSPAQA 304
            YW+ A  +   LFS  LF   TF IG++G+L  R+GSG LPF+ P+ LQ+ +G++P  A
Sbjct: 251 IYWMHARGNLSALFSLRLFHTPTFKIGLIGSLLGRIGSGMLPFMTPVFLQLGMGFTPFHA 310

Query: 305 GMSMIPLAAAAMLAKSIARPLIERFGYRIILTGNTLLLGILLASLGLVDEQTPYWLLLVQ 364
           G+ MIP+   +M  K +   L+ + GYR  L   TLLL ++     LV      W++ + 
Sbjct: 311 GLMMIPMVLGSMGMKRVVVRLVNQLGYRSALVSATLLLALITLIFPLVAIYGAMWMIPIV 370

Query: 365 LGLLGAVNSMQFTAMNTVTLIDLDDASASSGNSLLSVVAQLSLSLGVACAGALLGGFTAA 424
           L   G VNS++F++MNT+TL DL    ASSGNSLLS++ QLS+SLGV+ AG L+G F   
Sbjct: 371 LFFQGMVNSLRFSSMNTLTLKDLPPRLASSGNSLLSMIMQLSMSLGVSVAGLLIGLFAHQ 430

Query: 425 GSAEGVETTL-GAFQLTFVTIGVMAMLAAAIFLQLAPTDGRRA 466
            +     +T+  AF   ++++ ++  L A +F ++ P   + A
Sbjct: 431 QAITPDSSTMHTAFLYCYMSMALVIALPAWVFSKVPPDTQKNA 473