Pairwise Alignments

Query, 475 a.a., Drug resistance transporter, EmrB/QacA family from Pseudomonas putida KT2440

Subject, 481 a.a., DHA2 family efflux MFS transporter permease subunit from Rahnella sp. WP5

 Score =  315 bits (808), Expect = 2e-90
 Identities = 172/451 (38%), Positives = 257/451 (56%), Gaps = 3/451 (0%)

Query: 15  IPWVVAIAFFMQSLDGTILNTALPAMARSLAEDPLRMQGVIIAYMLTVALLIPASGWIAD 74
           I  +VA AFFM+ +DGT++ TALP MA S     + +   + AYMLT+A+LIPASGW A+
Sbjct: 25  IALLVAAAFFMEFIDGTVIATALPQMAISFGVSAVDLNAGMSAYMLTLAVLIPASGWAAE 84

Query: 75  RFGTKRIFFSAILLFSFGSLLCAAANSLGFLIFARVVQGLGGALMLPVGRLVVLRAYPRS 134
           RFG + +F  A+ +F+  SL CA A+S+   I  R++QG+GGALM+PVGRL VL+  P+ 
Sbjct: 85  RFGARNVFTFALGVFTLASLFCAMASSVSEFIILRIIQGIGGALMVPVGRLTVLKTTPKP 144

Query: 135 ELVRIMSFITIPGLLGPLLGPTVGGWLVEILSWHWIFLLNLPVGLLGCIAVWKFIPDLRG 194
           +L++ ++ +T P L+ P+LGP +GG++    SWHWIF +N+P+G++  +  W+  P    
Sbjct: 145 QLIKAIATLTWPALVAPILGPPLGGFITHYASWHWIFYINVPLGIIAMMLAWRLFPQEPS 204

Query: 195 AERTTFDGPGFLLFGAAMVLITIAMEGLGELHLPHLRVMLLLFAGMACLAAYWLRAGRDP 254
           AE   FD PGF+L G AM+ +   +E + + H+     +LLL  G+           RDP
Sbjct: 205 AEPKHFDKPGFVLTGLAMLSLVTGLELISQDHILWTAAILLLVTGVVLSVLAIRHLYRDP 264

Query: 255 EPLFSPSLFRVRTFAIGILGNLFARLGSGALPFLVPLLLQVALGYSPAQAGMSMIPLAAA 314
           EP+       + TF I + G    R+   A+PFL+PL+LQV  G  P  AG+ ++ + A 
Sbjct: 265 EPMVHLGAIVIPTFRISMGGGSLFRVTISAVPFLLPLMLQVGFGMDPFHAGLLVLAVFAG 324

Query: 315 AMLAKSIARPLIERFGYRIILTGNTLLLGILLASLGLVDEQTPYWLLLVQLGLLGAVNSM 374
            +  K    PLI RFG+R +L  N LL    L     +   TP WL++V L L G   SM
Sbjct: 325 NLAMKPATTPLIRRFGFRPVLVVNGLLSVFSLLFCAFLTPDTPDWLVMVLLFLGGLSRSM 384

Query: 375 QFTAMNTVTLIDLDDASASSGNSLLSVVAQLSLSLG--VACAGALLGGFTAAGSAEGVET 432
           QFT ++T+   D+     +  N+L S V QLS+ LG  V   G  LG      + +    
Sbjct: 385 QFTGISTLAFSDVPAKQMADANTLFSTVLQLSVGLGITVGALGTRLGE-QLVDALDWASV 443

Query: 433 TLGAFQLTFVTIGVMAMLAAAIFLQLAPTDG 463
              +F+++FV I V+ ++     L+L P  G
Sbjct: 444 PGMSFKISFVVIAVLTLIGWLDMLRLKPDAG 474