Pairwise Alignments

Query, 1317 a.a., proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase from Pseudomonas putida KT2440

Subject, 1058 a.a., L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) from Shewanella amazonensis SB2B

 Score =  893 bits (2308), Expect = 0.0
 Identities = 500/1000 (50%), Positives = 641/1000 (64%), Gaps = 37/1000 (3%)

Query: 126  AASIAEKLRNQKSVGGRAGIVQGLLQEFSLSSQEGVALMCLAEALLRIPDKGTRDALIRD 185
            A  +  K+R  +  G   GI    LQ++SL +QEG+ LMCLAEALLRIPD  T DALI D
Sbjct: 57   AHDLVAKVRQYEKKGLMVGI-DAFLQQYSLETQEGIILMCLAEALLRIPDAETADALIAD 115

Query: 186  KISTGNWQPHLGNSPSLFVNAATWGLLLTGKLVSTHNETGLTSS--LTRIIGKSGEPMIR 243
            K+S   W  H+  S S+ VNA+TWGL+LTGK+V        T S  L+R++ + GEP+IR
Sbjct: 116  KLSGAKWDEHMSKSDSVLVNASTWGLMLTGKIVQLDKNLDGTPSNLLSRLVNRLGEPVIR 175

Query: 244  KGVDMAMRLMGEQFVTGETIAEALANASRFEAKGFRYSYDMLGEAALTEHDAQKYLASYE 303
            + +  AM++MG+QFV G TI E L NA+     G+ +SYDMLGEAALT  DA KY   Y 
Sbjct: 176  QAMYAAMKIMGKQFVLGRTIEEGLKNAAEKRKLGYTHSYDMLGEAALTMKDADKYYRDYA 235

Query: 304  QAIHSIGKASHGRGIYEGPGISIKLSALHPRYSRAQYERVMEELYPRLLSLTLLAKQYDI 363
             AI ++G A         P ISIKLSALHPRY  A  +RVM ELY  L+ L   A+  ++
Sbjct: 236  NAIQALGTAKFDESEAPRPTISIKLSALHPRYEVANEDRVMTELYATLIKLIEQARSLNV 295

Query: 364  GLNIDAEEADRLELSLDLLERLCFEPSLAGWNGIGFVIQAYQKRCPYVIDYVIDLAKRSR 423
            G+ IDAEE DRLELSL L ++L    +  GW  +G V+QAY KR   V+ ++  LAK   
Sbjct: 296  GIQIDAEEVDRLELSLKLFKKLYQSDAAKGWGLLGIVVQAYSKRALPVLMWLTRLAKEQG 355

Query: 424  HRLMIRLVKGAYWDSEIKRAQVEGLEGYPVYTRKVYTDVSYVACARKLL--AVPEAIYPQ 481
              + +RLVKGAYWDSE+K AQ  G  GYP++TRK  TDVSY+ACAR LL  A    IYPQ
Sbjct: 356  DEIPLRLVKGAYWDSELKWAQQAGEAGYPLFTRKAATDVSYLACARYLLSEATRGVIYPQ 415

Query: 482  FATHNAHTLSAIYHIAGQNYYPGQYEFQCLHGMGEPLYEQVVGKIADGKLNRPCRVYAPV 541
            FA+HNA T++AI  + G      ++EFQ LHGMG+ LY+ V+ + A   +    R+YAP+
Sbjct: 416  FASHNAQTVAAITAMVGDR----KFEFQRLHGMGQELYDTVLAEAAVPTV----RIYAPI 467

Query: 542  GTHETLLAYLVRRLLENGANTSFVNRIADHSISIQELVADPVASIERMGTQEGSIGLPHP 601
            G H+ LL YLVRRLLENGANTSFV+++ D    I+ LV  P+ +++   T      L + 
Sbjct: 468  GAHKDLLPYLVRRLLENGANTSFVHKLVDPKTPIESLVTHPLKTLQGYKT------LANN 521

Query: 602  RIPLPRDLYGTERANSAGIDMANEHRLASLSCAMLATAHNDWKAAPLLACAASESAAAPV 661
            +I  P D++G ER NS G++M           A+       W A PL+           V
Sbjct: 522  KIVKPADIFGAERKNSKGLNMNIISESEPFFAALEKFKDTQWSAGPLVNGETLSGEVRDV 581

Query: 662  LNPADHRDVVGHVQEATVADVDNAIQCALNAAPIWQATPPAERAAILERTADLMEAEIQP 721
            ++P +    VG V  A  A ++ AI  A  A   W  TP   RA  L++ ADL+E   + 
Sbjct: 582  VSPYNTTLKVGQVAFANEATIEQAIAGADKAFASWCRTPVETRANALQKLADLLEENREE 641

Query: 722  LMGLLIREAGKTFANAIAEVREAVDFLRYYAVQARNDFSNDAHRP-------------LG 768
            L+ L  REAGK+  + I EVREAVDF RYYAVQA+   S     P              G
Sbjct: 642  LIALCTREAGKSIQDGIDEVREAVDFCRYYAVQAKKMMSKPELLPGPTGELNELFLQGRG 701

Query: 769  PVVCISPWNFPLAIFTGQVAAALAAGNPVLAKPAEQTPLIAAQAVRLLLEAGIPEGVLQL 828
              VCISPWNFPLAIF GQVAAALA GN V+AKPAEQT LI  +AV+L  EAGIP+ VLQ 
Sbjct: 702  VFVCISPWNFPLAIFLGQVAAALATGNTVIAKPAEQTCLIGFRAVQLAHEAGIPKDVLQF 761

Query: 829  LPGRGETVGAGLVGDERVKGVMFTGSTEVARLLQRNVAGRLDNQGRPIPLIAETGGQNAM 888
            LPG G  VGA L  DER+ GV FTGST  A+++ R +AGR    G  IPLIAETGGQNAM
Sbjct: 762  LPGTGAVVGAKLTSDERIGGVCFTGSTTTAKVINRALAGR---DGAIIPLIAETGGQNAM 818

Query: 889  IVDSSALTEQVVIDVVSSAFDSAGQRCSALRVLCLQEDSADRVIEMLKGAMAESRLGCPD 948
            +VDS++  EQVV DVVSSAF SAGQRCSALRVL LQED A+RV+++LKGAM E  LG P 
Sbjct: 819  VVDSTSQPEQVVNDVVSSAFTSAGQRCSALRVLYLQEDIAERVLDVLKGAMDELTLGNPG 878

Query: 949  RLAVDIGPVIDAEAKAGIEKHIQGMREKGRPVYQVAIADAAEIKRGTFVMPTLIELDSFD 1008
             +  D+GPVIDA AKA +  HI  +++ GR ++Q+++ +  E   G FV PT +E+DS  
Sbjct: 879  SVKTDVGPVIDAAAKANLNAHIDHIKQVGRLIHQLSLPEGTE--NGHFVAPTAVEIDSIK 936

Query: 1009 ELKREIFGPVLHVVRYNRRNLDQLIEQINNSGYGLTLGVHTRIDETIAKVVETANAGNMY 1068
             L +E FGP+LHVVRY    L ++I+ IN++G+GLTLG+H+R +    +V +  N GN+Y
Sbjct: 937  VLTKENFGPILHVVRYKAAGLQKVIDDINSTGFGLTLGIHSRNEGHALEVADKVNVGNVY 996

Query: 1069 VNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLSTR 1108
            +NRN +GAVVGVQPFGG+GLSGTGPKAGGP YL R ++ +
Sbjct: 997  INRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLTRFVTEK 1036



 Score = 36.6 bits (83), Expect = 1e-05
 Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 23/192 (11%)

Query: 1148 NQLADLAALCSQFASQSQSGIAR--LLPGPTGERNSYTILPREHVLCLADNETDL---LA 1202
            +++ +    C  +A Q++  +++  LLPGPTGE N   +  R   +C++     L   L 
Sbjct: 659  DEVREAVDFCRYYAVQAKKMMSKPELLPGPTGELNELFLQGRGVFVCISPWNFPLAIFLG 718

Query: 1203 QFAAVLAVGSSAVWVDGEP---------GKALRARLPRE----LQAKVKLVADWNKDEVA 1249
            Q AA LA G++ +    E            A  A +P++    L     +V      +  
Sbjct: 719  QVAAALATGNTVIAKPAEQTCLIGFRAVQLAHEAGIPKDVLQFLPGTGAVVGAKLTSDER 778

Query: 1250 FDAVIHHGDSDQLRGVCQQVAKRAGAIVGVHGLSSGDHQIALE-----RLVIERAVSVNT 1304
               V   G +   + + + +A R GAI+ +   + G + + ++       V+   VS   
Sbjct: 779  IGGVCFTGSTTTAKVINRALAGRDGAIIPLIAETGGQNAMVVDSTSQPEQVVNDVVSSAF 838

Query: 1305 AAAGGNASLMTI 1316
             +AG   S + +
Sbjct: 839  TSAGQRCSALRV 850



 Score = 30.0 bits (66), Expect = 0.001
 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 13/55 (23%)

Query: 1274 GAIVGVH-----GLSS------GDHQIALERLVIERAVSVNTAAAGGNASLMTIG 1317
            GA+VGV      GLS       G H   L R V E+  + N  A GGNA+L+++G
Sbjct: 1003 GAVVGVQPFGGQGLSGTGPKAGGPHY--LTRFVTEKTRTNNITAIGGNATLLSLG 1055