Pairwise Alignments

Query, 542 a.a., sodium/L-proline transporter from Pseudomonas putida KT2440

Subject, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (261), Expect = 5e-27
 Identities = 112/490 (22%), Positives = 201/490 (41%), Gaps = 36/490 (7%)

Query: 57  ITFVIYIAAMVLIGFAAYRATNNLSDYILGGRSLGSVVTALSAGASDMSGWLLMGLPGAI 116
           I   IY+   +LI +   + +   +D+  GGR  G     +S  A+ +S    +G+PG +
Sbjct: 8   IVIAIYLILTILISWFVNQRSIGNTDFSTGGRQFGWFTAGVSILATYISAMTFIGMPGWV 67

Query: 117 YFAGLSEAWIAIGLTVGAYLNWLFVAGRLRVQTEHNGDALTLPDYFSSRFEDNSGLLRII 176
           Y +G+    I +   +  +   +F      +   +     ++ +Y   RF       R I
Sbjct: 68  YQSGMEALNIHLNYPIVIFFAVVFF-----IPVFYRMGFTSIYEYLEHRF---GVYARTI 119

Query: 177 SAIVILVFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATIAYTFVGGFLAVSWTDT 236
           +++V ++   I     + A A +      +S   A+      T  YT+ GG   V WTD 
Sbjct: 120 NSVVFILVQCISSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGGISTVIWTDM 179

Query: 237 VQASLMIFALILTPVIVLISTGGFDQTFAAIEAVNPANFDMLKGAT-FIGIISLMGWGLG 295
           +Q++++I   +   V++L+   G          +    FD+    T + G++++    + 
Sbjct: 180 LQSAVLIAGSVAIFVLLLLQVDGVHGVSREQLNIINLQFDLGVDTTLWAGVVAVSFLHMS 239

Query: 296 YFGQPH-ILARFMAADSVKSIAKARRISMTWMILCLAGTCAVGFF--------GIAYFSA 346
            +G    I+ R +A    K+  K+       M+LC  G   + FF         I Y   
Sbjct: 240 VYGTNQLIIQRTLATRCEKTAQKS-------MLLCGYGAFFIYFFFALLGVLLSIFYQER 292

Query: 347 HPELAGPVSENHERVFIELAKILFNPWVAGVLLSAILAAVMSTLSCQLLVCSSALTEDFY 406
           H         N   V ++      NPWV G+++SA+ AA MSTL       ++  T D Y
Sbjct: 293 H-------FTNSNEVILDFVFHHTNPWVIGLIISALAAAAMSTLDSTYNSMATVATFDLY 345

Query: 407 KAFLRKNASQVELVWVGRLMVLAVALIAI--AMAANPENRVLGLVAYAWAGF-GAAFGPV 463
           + F+R+NA       V R M L  A + +  A+ A     VL  +A   + F G   G  
Sbjct: 346 QRFIRRNAPDHHYQAVARKMSLVAAGLVVIPALLAVSNESVLKTIASLTSIFVGIRLGSF 405

Query: 464 VLISVLWKGMTRNGALAGIVVGALTVILWKNFDTLGLYEIIPGFLFASIAIVLVSKLGSP 523
           VL  +        G +AG ++    V+  +  D    +    G +F  ++ V++S+    
Sbjct: 406 VL-GLFSNQANEKGVIAGSIISIAAVLGARLMDIAWPWFAPIGTVFFLVSGVVISRYWGD 464

Query: 524 SQTMVKRFEA 533
           +    + F A
Sbjct: 465 NSIQQQAFIA 474