Pairwise Alignments

Query, 542 a.a., sodium/L-proline transporter from Pseudomonas putida KT2440

Subject, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

 Score =  160 bits (405), Expect = 1e-43
 Identities = 118/457 (25%), Positives = 212/457 (46%), Gaps = 31/457 (6%)

Query: 55  LTITFVIYIAAMVLIGFAAYRATNNLSDYILGGRSLGSVVTALSAGASDMSGWLLMGLPG 114
           L +  +IY+  +  +G+  ++ T++  DY++GGR +   V A+S GA+ +S   ++G  G
Sbjct: 6   LNVIVLIYLLVIGYLGYKGWKGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIVGFGG 65

Query: 115 AIYFAGLSEAWIA-IGLTVGAYLNWLFVAGRLRVQTEHNGDALTLPDYFSSRFEDNSGLL 173
                G+S  W+  + + +G ++ ++F   R R +  HN +ALT P+  + RFE  S  +
Sbjct: 66  FSGLFGMSLLWLTFLNIFLGIFIAFVFFGKRTR-KMGHNLNALTFPELLAKRFE--SKFI 122

Query: 174 RIISAIVILVFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATIAYTFVGGFLAVSW 233
           +  S ++I     IY A+ ++  AR  E+T  +S++ AL   +     Y  +GG   V +
Sbjct: 123 QWFSGLLIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGVMY 182

Query: 234 TDTVQASLMIFALILTPVIVLISTGGFDQTFAAIEAVN---PANFDMLKGATFIG----- 285
           TD  Q ++M F ++    +     GG      AI  ++   PAN   +  A +       
Sbjct: 183 TDAFQGTIMFFGMLFLLYMTYDILGGVTTAHQAISNMSGLVPANLASVGHAGWTSMPTFG 242

Query: 286 ------IIS--LMGWGLGYFGQPHILARFMAADSVKSIAKARRISMTWMILCLAGTCAVG 337
                 I+S  ++G G+G   QP ++ RFM   S + + +A  I   ++++       VG
Sbjct: 243 SPMWWTIVSSIILGVGIGVLAQPQLIVRFMTVKSNRELNRAVLIGAVFILIATGTAYVVG 302

Query: 338 FFGIAYF---SAHPELAGPVSE-----NHERVFIELAKILFNPWVAGVLLSAILAAVMST 389
                YF        +   VSE     N + +           W   + L ++LAA MST
Sbjct: 303 TLSNVYFMNTEGVLSIGATVSEAFPTGNSDSIMPLYINKAMPEWFIYIFLVSLLAAAMST 362

Query: 390 LSCQLLVCSSALTEDFYKAFL-RKNASQVELVWVGRLMVLAVALIAIAMAANPENRVLGL 448
           +S Q     +++  D Y+    +K  + V +  +G  +++A+ + AI     P   V   
Sbjct: 363 ISSQFHAQGTSIGRDVYETICGKKGLNSVIITRLG--IIVAIVIAAILGYILPGGIVARG 420

Query: 449 VAYAWAGFGAAFGPVVLISVLWKGMTRNGALAGIVVG 485
            A  +    AAF P   + + WK  T+ GA+AG++ G
Sbjct: 421 TALFFGLCSAAFLPAYALGLFWKRTTKEGAIAGLLTG 457