Pairwise Alignments

Query, 278 a.a., 23S rRNA m(6)A2030 methyltransferase from Pseudomonas putida KT2440

Subject, 302 a.a., Protein involved in catabolism of external DNA from Xanthomonas campestris pv. campestris strain 8004

 Score =  217 bits (553), Expect = 2e-61
 Identities = 124/301 (41%), Positives = 163/301 (54%), Gaps = 23/301 (7%)

Query: 1   MNYRHAFHAGNHADVLKHIVLTRLIALMSRKEQPFAYIDTHAGLGLYDLQGDQASRTGEY 60
           MNYRHAFHAGNHADVLKHI L  LI  + RK+ PF  +DTHAG G Y L G+++ +T E 
Sbjct: 1   MNYRHAFHAGNHADVLKHIALLALIDTLKRKDTPFFVLDTHAGRGRYQLGGEESRKTNEA 60

Query: 61  LEGVARLWNRDDLPAMADDYLRIIK-----------------RLNADGELRYYPGSPELA 103
             GV RL     LP + + YLR ++                 R  A  ++ +YPGSP LA
Sbjct: 61  DAGVMRLMAEATLPEVVERYLRAVQADNAAVARPAVPGQKAARPTAGIQINHYPGSPLLA 120

Query: 104 RRLMRQQDRALLNEKHPEDGPLLKENMKKDPRVTVHLGEGWHVPRALLP-----VQEKRA 158
            + +R QDR    E  P++   LK     D RV VH G+G+   RA LP     V+  R 
Sbjct: 121 AQALRAQDRMAFCELQPDEAQALKTLFANDSRVRVHAGDGYAAIRAFLPPRAGEVKIGRG 180

Query: 159 IMLIDPPFE-QADELKRCTTAMKEAIGRMRQTVAAIWYPIKDQRSLTRYYQDLTSTGAPK 217
           ++LIDPP+E Q  E  +   +++EA+ R  Q +  +WYPIK +RSL    +   +  A  
Sbjct: 181 LVLIDPPYESQGAEYPQVIASVREALARWPQAICMVWYPIKLRRSLQPLMRKAAALPAKS 240

Query: 218 LLRVELYVHHQDSPQGLNGSGLAIANPPWGLEDELKELLPWLAKELAQTAGSYRMDWLIA 277
           +L  EL VH  DSP  L GSGL I N PW  +  L   LP L   L +   S R++WL  
Sbjct: 241 VLMAELQVHPDDSPLRLTGSGLLIVNAPWQFDQVLAPALPALKAHLGEAGASTRLEWLRQ 300

Query: 278 E 278
           E
Sbjct: 301 E 301