Pairwise Alignments

Query, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

Subject, 617 a.a., multidrug/protein/lipid ABC transporter family, ATP-binding and permease protein from Caulobacter crescentus NA1000

 Score =  292 bits (747), Expect = 3e-83
 Identities = 184/506 (36%), Positives = 274/506 (54%), Gaps = 7/506 (1%)

Query: 89  IAAWQGLGSFLGNYFLAKVSLSLVHDLRVALFNKLLVLPNRYFDNHNSGHLISRITFNVT 148
           +A    L + L  +F+ ++   +V DLR  L+   L L   YF    +G ++SR+T +V 
Sbjct: 103 VALVLALATALRFFFITRLGERVVADLRRKLYGHTLSLDQPYFLKTRTGEVLSRLTTDVA 162

Query: 149 MVTGAATDAIKVVIREGLTVVFLFAYLLWMNWHLTLVMVAILPVIAVMVSIASKKFRKQS 208
           +V      +I + +R  L ++     +  ++  L   +V ++PVI   + +  ++ RK +
Sbjct: 163 LVEQLVGASISIALRNILNLIGGLTAMAVVSPKLAGFIVLMVPVILAPMFLVGRRVRKLT 222

Query: 209 KKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEQQRFGQASQSNTDKQLRMTKTGSLYTP 268
              Q    D    A E++     V++FG E+    RFG A ++     +R   T +  T 
Sbjct: 223 VTAQDRFADAVGYAGESLDALETVQAFGRESASSGRFGAAVEAAYKASVRRITTRATMTA 282

Query: 269 MLQLVIYSAMAALMFLV--LFLRGDSTAGDLVAYITAAGLLPKPIRQLSEVSSTIQKGLA 326
           M+  + +  +  L++    L L G+ T G L  +   A +    I  L EV   +QK   
Sbjct: 283 MVITLAFGGITLLLWTGARLVLAGEMTGGTLAQFAMLAVMAAGSIGALGEVWGDVQKASG 342

Query: 327 GAESIFEQLDEAPEVDTGTVEKERV---EGRLEVRNLSFTYPGT-EREVLSDISFVAEPG 382
             + I E L+  P++      K      +G +   N+ F YPG  +   L+      +PG
Sbjct: 343 AMDRISELLNAKPDIAAPPQPKTLPVPGQGEIAFENVVFAYPGRPDLPALNGFDLRVKPG 402

Query: 383 QMIALVGRSGSGKSTLAALIPRFYHHDKGQILLDGVEIEHYRLRNLRRHVSQVTQHVTLF 442
           + +ALVG SG+GKST+  L+ RFY    G ILLDGV +       +R  ++ V Q   LF
Sbjct: 403 ETVALVGPSGAGKSTVLRLLLRFYDPQSGCILLDGVNLRDAEPAEVRARMALVAQDSPLF 462

Query: 443 NDTVANNIAYGDLAGAPRADIEAAAADAYAKEFVDRLPKGFDTEVGENGVLLSGGQRQRL 502
           + +  +NI +G    A    + AAA  A A  F+  LP+GFDT VGE    LSGGQRQRL
Sbjct: 463 SGSAMDNIRFGR-PDATDEQVRAAADAAQATGFLSALPEGFDTPVGERAKTLSGGQRQRL 521

Query: 503 AIARALLKNAPLLILDEATSALDTESERHIQAALDHVMQGRTTLVIAHRLSTIEKADQIL 562
           AIARAL++ AP+L+LDEATSALD ESE+ +Q AL   M+GRTTLVIAHRL+T+ KAD+I+
Sbjct: 522 AIARALVREAPILLLDEATSALDAESEQLVQQALATAMEGRTTLVIAHRLATVLKADRIV 581

Query: 563 VMDQGRLVERGTHTELLAANGHYARL 588
           VM++GR+VE+G H EL A  G YARL
Sbjct: 582 VMEEGRVVEQGAHAELFAKGGLYARL 607