Pairwise Alignments

Query, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

Subject, 609 a.a., ABC transporter ATP-binding protein from Bifidobacterium breve UCC2003

 Score =  268 bits (684), Expect = 6e-76
 Identities = 177/585 (30%), Positives = 297/585 (50%), Gaps = 13/585 (2%)

Query: 15  KIYFRLLSYVKPYVGIFLLSIVGFVIFASTQPMLAGILKYFVDGLSNPEAVLFPNVPYLR 74
           K+  +L+ + + YV   ++++V        Q +    LK   + ++     +    P L 
Sbjct: 20  KVMGKLVRFCRKYVPAIIIALVLGAAGTICQIIGPDKLKDMTNEITKGLPAVVHGKPVLN 79

Query: 75  --DLQLLQAVPLLIILIAAWQGLGSFLGNYFLAKVSLSLVHDLRVALFNKLLVLPNRYFD 132
             D+  +  +  L++++     L S++ ++ +A V+     +LR ++  K+  LP  YFD
Sbjct: 80  SIDMGAVARIGWLLVVLYVGYALLSYIQSWMMATVTQRTAQELRESISKKINKLPLSYFD 139

Query: 133 NHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFAYLLWMNWHLTLVMVAILPV 192
             + G ++SRIT +V  +      ++  +I      V     + + NW + L  +    +
Sbjct: 140 KVSYGDVLSRITNDVDAIGQTLGQSLGSLITSATLFVGALVMMFYNNWIMALCAIGSSII 199

Query: 193 IAVMVSIASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEQQRFGQASQSN 252
             +++ +  K  +K   + QVA+GDV     E   G+ +V+++ GEA   +RF + +   
Sbjct: 200 GLIIMMVIMKASQKYFTRQQVALGDVNGHVEEMYAGHTIVKAYNGEADSIRRFERYNADL 259

Query: 253 TDKQLRMTKTGSLYTPMLQLV--IYSAMAALMFLVLFLRGDSTAGDLVAYITAAGLLPKP 310
            D   +      L  P++  V      +  ++   L + G    G +VA++    L  +P
Sbjct: 260 YDSGWKSQFLSGLMMPLMNFVGNFGYVVVCVVGAALAMDGQIEFGVIVAFMMYIRLFTQP 319

Query: 311 IRQLSEVSSTIQKGLAGAESIFEQLDEAPEVDTGT------VEKERVEGRLEVRNLSFTY 364
           + Q ++    +Q+  A +E +F  L+E+   D          +   V G +E  ++ F Y
Sbjct: 320 LSQFAQAFQNLQRCAAASERVFGFLEESEMADESGKQVLLGAQGHEVHGDVEFSHVRFEY 379

Query: 365 PGTEREVLSDISFVAEPGQMIALVGRSGSGKSTLAALIPRFYHHDKGQILLDGVEIEHYR 424
               + +++D S     GQ +A+VG +G+GK+T+  L+ RFY    G I +DGV+ +   
Sbjct: 380 EAG-KPIINDFSASVSSGQKVAIVGPTGAGKTTMVNLLMRFYEIAGGSIAIDGVDTKSVP 438

Query: 425 LRNLRRHVSQVTQHVTLFNDTVANNIAYGDLAGAPRADIEAAAADAYAKEFVDRLPKGFD 484
             N+    S V Q   +FNDTV  NIAY    G     I +A        ++  LP G+D
Sbjct: 439 RWNVHDQFSMVLQDTWIFNDTVRENIAYSK-PGVTDEQIISACKAVGLHHYIMSLPNGYD 497

Query: 485 TEVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMQGRT 544
           T + EN  L S GQ+Q L IARA++++AP+LILDEATS++DT +E  IQ A+D +   RT
Sbjct: 498 TVLDENSSL-SAGQKQLLTIARAMVQDAPILILDEATSSVDTRTEELIQKAMDALTVDRT 556

Query: 545 TLVIAHRLSTIEKADQILVMDQGRLVERGTHTELLAANGHYARLH 589
           + VIAHRLSTI  AD ILVM+ G ++ERGTH ELLAA G YA L+
Sbjct: 557 SFVIAHRLSTIRDADMILVMNHGDVIERGTHEELLAAGGFYADLY 601