Pairwise Alignments

Query, 731 a.a., Cyclolysin secretion/processing ATP-binding protein CyaB from Pseudomonas putida KT2440

Subject, 605 a.a., lipid A export permease/ATP-binding protein MsbA from Pseudomonas stutzeri RCH2

 Score =  281 bits (718), Expect = 9e-80
 Identities = 181/524 (34%), Positives = 294/524 (56%), Gaps = 12/524 (2%)

Query: 208 LTTLDVIALGLLVVVLFETLLSGLRTYVAAHTASRIDVELGAKLFRHLIDLPTAYFHARR 267
           L  L  + L ++ + L + + S L  +  A  +  +  +L   LF +++ LP  YF +  
Sbjct: 78  LKLLQAVPLLIVFIALMQGIGSFLGNFFLAKVSLGLVHDLRLALFNNMLTLPNRYFDSHN 137

Query: 268 VGDSVARVRELENIRSFLTNNSITLVLDVLFSVVFIAVMFLYSGW-LTLVVVGSLPFYFL 326
            G  ++R+     + +    ++I +V+    +V+F+    L+  W LTLV++  LP   +
Sbjct: 138 SGHLISRITYNVTMVTGAATDAIKVVVREGMTVIFLFATLLWMNWKLTLVMLAILP---V 194

Query: 327 VSLVVTPLLRALIDQS--FQRGAENQAFLV-EAVNGIDTLKSMAVEPQVTRRWNDQLAAY 383
           +  +V+   +    QS   Q    +   +  E + G   ++S   EP    R+    +  
Sbjct: 195 IGFMVSSASKKFRKQSKKIQLAMGDVTHVASETIQGYRVVRSFGGEPYERNRFLTASSEN 254

Query: 384 VSASFKTQNLSSLANESVGLIGKLVTVATLWLGARLVIEGALTVGELIAFNMLAGRVSQP 443
            +   +    +++   S+ L+  + +   + +   L++ G  + G+L+A+  LAG + +P
Sbjct: 255 TAKQLRMVKTNAVYTPSLQLV--IYSAMAVLMFLVLLLRGDASAGDLVAYITLAGLLPKP 312

Query: 444 IIRLAQLWTSFQQTGVSIQRLGDILNTRTEVNQGKGTVLPTLVGQIELDRVCFRYRPDGG 503
           I +L+++ ++ Q+     + + + L+   E++QG       + G +E+  + F Y     
Sbjct: 313 IRQLSEVSSTIQKGVAGAESIFEQLDEEPEIDQGT-LEREAVSGHLEVRNLDFVYPGTDK 371

Query: 504 EVVRDVSLKIAAGEVIGVVGRSGSGKSTLTRLIQRLYSPERGRVLPDGADLAVADVASLR 563
           +V+RD+S  I  G+++ +VGRSGSGKSTL  LI R Y  E G++L DGAD+    + +LR
Sbjct: 372 QVLRDISFTIEPGQMVALVGRSGSGKSTLANLIPRFYHHEAGQILLDGADVESYTLRNLR 431

Query: 564 RQIGVVLQDNVLFRRTVRENIALGNPA-APLEEVIAAATLAGAHEFILELPDGYETLIGE 622
           R I +V Q   LF  TV  NIA G+ A APL+++  AA  A A EFI ++P+GY+TL+GE
Sbjct: 432 RHIALVTQQVTLFNDTVANNIAYGDLAGAPLDDIRRAARDAYADEFIEQMPEGYQTLVGE 491

Query: 623 HGASLSGGQRQRIAIARALFGNPRILIFDEATSALDYESERIIQQNMARICAQRTVIIIA 682
           +G  LSGGQRQR+AIARAL  N  +LI DEATSALD ESER IQ  +  +   RT ++IA
Sbjct: 492 NGVLLSGGQRQRLAIARALLKNSPVLILDEATSALDTESERHIQGALDHVMQGRTTLVIA 551

Query: 683 HRLSAVRHADRIVVMERGQIIEQGTHDELLGYPQGTYAYLHQLQ 726
           HRLS +  AD+I+VME+G+I+E+GTH ELL    G YA LH  Q
Sbjct: 552 HRLSTIEKADQILVMEQGRIVERGTHAELLAV-NGAYARLHATQ 594