Pairwise Alignments

Query, 731 a.a., Cyclolysin secretion/processing ATP-binding protein CyaB from Pseudomonas putida KT2440

Subject, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  360 bits (925), Expect = e-103
 Identities = 221/687 (32%), Positives = 373/687 (54%), Gaps = 13/687 (1%)

Query: 36  LITLARYHGVAVSAEQLQHDHAAAGERFSTGPLLRAFQQLGLKAKHRSVDPARLQQTPLP 95
           L+ ++RY+G+A S E L +    A  + +     R+ ++ GL AK       ++     P
Sbjct: 9   LVYVSRYYGLANSPEALINGLPLADGKLTPFLFPRSAERAGLIAKENRAPLDQIPHLVFP 68

Query: 96  AIAVDTRGEYFIIARVEGEQV---LVQDPHSRAPQALTLAELLVRWSGELILV----RSD 148
            + +   GE  ++  +  E     +V       P A +L++L   + G   +V    R D
Sbjct: 69  VVLLLKGGEACVLNSINQETQEAEIVTAESGLVPVAYSLSDLEAMYIGRYFMVKKQFRFD 128

Query: 149 AQLPLGLSRFDFTWFIPALVKYRRLFGEVLVVSLVIQILALLTPLFFQVVMDKVLVHRGL 208
            + P  L   D  WF   + K + ++ +VL+ SL+I + A+  P+F ++V DKV+ +   
Sbjct: 129 ERSPEVLKPRDGHWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYDKVVPNLAF 188

Query: 209 TTLDVIALGLLVVVLFETLLSGLRTYVAAHTASRIDVELGAKLFRHLIDLPTAYFHAR-- 266
            TL V++ G+LV+ LF+ +   LR+Y       + D+ + +KLF  ++ +      AR  
Sbjct: 189 ETLWVLSSGILVIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIR---MEARPP 245

Query: 267 RVGDSVARVRELENIRSFLTNNSITLVLDVLFSVVFIAVMFLYSGWLTLVVVGSLPFYFL 326
            VG     ++E E+IR F T+ +I+ ++D+ F+++F+ +++L +G L  V V  +    +
Sbjct: 246 SVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVLILVI 305

Query: 327 VSLVVTPLLRALIDQSFQRGAENQAFLVEAVNGIDTLKSMAVEPQVTRRWNDQLAAYVSA 386
            S ++   L+  I++  +  ++  A L+E++ G++T+K    + Q   RW + +A   + 
Sbjct: 306 YSFLIQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAHMANW 365

Query: 387 SFKTQNLSSLANESVGLIGKLVTVATLWLGARLVIEGALTVGELIAFNMLAGRVSQPIIR 446
           + K++ ++     + G + +   +  + +G  L+  G LT+G LIA  ML+GR   P+++
Sbjct: 366 NIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQ 425

Query: 447 LAQLWTSFQQTGVSIQRLGDILNTRTEVNQGKGTV-LPTLVGQIELDRVCFRYRPDGGEV 505
           L+ L T + Q   S+  +  +++   E  +GK  +  P + G+IELDRV F Y       
Sbjct: 426 LSLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPNSPIAS 485

Query: 506 VRDVSLKIAAGEVIGVVGRSGSGKSTLTRLIQRLYSPERGRVLPDGADLAVADVASLRRQ 565
           VRD+SL I  GE + ++GR GSGK+TL RLI  LY P  G V  D  D++      +RR 
Sbjct: 486 VRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRN 545

Query: 566 IGVVLQDNVLFRRTVRENIALGNPAAPLEEVIAAATLAGAHEFILELPDGYETLIGEHGA 625
           IG V QD+VLF  ++R+NI LG P +   EV+ AA  AG   F  + P G E  +GE G 
Sbjct: 546 IGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEGGM 605

Query: 626 SLSGGQRQRIAIARALFGNPRILIFDEATSALDYESERIIQQNMARICAQRTVIIIAHRL 685
            LSGGQRQ ++IARA  G P +L+ DE TSA+D  SE  I+Q ++++    T+I+I H+ 
Sbjct: 606 LLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILITHKT 665

Query: 686 SAVRHADRIVVMERGQIIEQGTHDELL 712
           S +   DR++VME+G II  G   E+L
Sbjct: 666 SMLDVVDRVIVMEKGCIIADGPKHEVL 692