Pairwise Alignments

Query, 731 a.a., Cyclolysin secretion/processing ATP-binding protein CyaB from Pseudomonas putida KT2440

Subject, 1000 a.a., cyclic nucleotide-binding domain (cNMP-BD) protein from Synechococcus elongatus PCC 7942

 Score =  527 bits (1357), Expect = e-153
 Identities = 297/726 (40%), Positives = 449/726 (61%), Gaps = 23/726 (3%)

Query: 19  ADLSDGNANT-----------IESGLVCLITLARYHGVAVSAEQLQHDHAAAGERFSTGP 67
           ADL DG+  +           +     CL  +AR   +    +Q+Q        R  +  
Sbjct: 276 ADLYDGSQRSQKFPVERGNDPVSEAQACLKMIARSLKIPFRRDQVQRVIEEQYRRLKSIS 335

Query: 68  LLRAFQQLGLKAKHRSVDPARL---QQTPLPAIAVDTRGEYFIIARVEGEQVLVQDPHSR 124
           L      L ++A    +   RL    + PLPA+     G   + A V+   +   DP  +
Sbjct: 336 LQELAVLLEMQALRSQILQLRLVDLPRVPLPALIAWEEGHAVLYA-VDATSITFADPR-Q 393

Query: 125 APQALTLAELLVRWSGE-LILVRSDAQLPLGLSRFDFTWFIPALVKYRRLFGEVLVVSLV 183
               L+LAE   RW     IL+ +  Q      RF  +WF P++ +YR    EVL+ SLV
Sbjct: 394 GLITLSLAEFQQRWGNAGTILLATKTQFTQS-QRFGLSWFWPSIQRYRVRLIEVLIASLV 452

Query: 184 IQILALLTPLFFQVVMDKVLVHRGLTTLDVIALGLLVVVLFETLLSGLRTYVAAHTASRI 243
           +Q+  L  PL  Q V+DKV+    L  L+  A+ L+++ +F+ LLS LRTY+ A T +RI
Sbjct: 453 VQLFTLANPLIIQQVIDKVIGQGSLNNLNSFAVLLVILGVFQGLLSSLRTYLFADTTNRI 512

Query: 244 DVELGAKLFRHLIDLPTAYFHARRVGDSVARVRELENIRSFLTNNSITLVLDVLFSVVFI 303
           D++LG+ +   L+ LP  YF  R VG+  +RV+ELE IRSFLT  ++T V+D +FSV++I
Sbjct: 513 DLKLGSDIIDRLLKLPLRYFERRPVGELSSRVQELEKIRSFLTGTALTTVMDAMFSVIYI 572

Query: 304 AVMFLYSGWLTLVVVGSLPFYFLVSLVVTPLLRALIDQSFQRGAENQAFLVEAVNGIDTL 363
            VM +YS +LTLV + ++P +  ++   +P++R  + +  +R AE Q+ LVE ++GI T+
Sbjct: 573 LVMLVYSWFLTLVALSTVPIFVAITFFASPVVRRQLREKAERNAETQSQLVEVLSGIQTV 632

Query: 364 KSMAVEPQVTRRWNDQLAAYVSASFKTQNLSSLANESVGLIGKLVTVATLWLGARLVIEG 423
           K+  +E +   +W ++ A Y++A F+  N S+ A+       +L  +  LW+G  LV + 
Sbjct: 633 KAQNIELKARWQWQERYARYIAAGFRNINTSTAASSLTNFFNQLSGLLVLWVGVYLVFDN 692

Query: 424 ALTVGELIAFNMLAGRVSQPIIRLAQLWTSFQQTGVSIQRLGDILNTRTEV---NQGKGT 480
            L++G+LIAF +++G V+QP++RLAQLW +FQ+T +S++RL DI++T  E    +QGK  
Sbjct: 693 QLSLGQLIAFRIISGYVTQPLLRLAQLWQNFQETALSLERLADIVDTPQESDDDDQGK-I 751

Query: 481 VLPTLVGQIELDRVCFRYRPDGGEVVRDVSLKIAAGEVIGVVGRSGSGKSTLTRLIQRLY 540
            +P + G++E   + FR+   G   + +V+L+I AGE +G+VG+SGSGKSTL +L+ RLY
Sbjct: 752 PMPMINGKVEFRNLSFRFGEQGPLQLSNVTLEIPAGEYVGIVGQSGSGKSTLMKLLPRLY 811

Query: 541 SPERGRVLPDGADLAVADVASLRRQIGVVLQDNVLFRRTVRENIALGNPAAPLEEVIAAA 600
           SP  G +L DG D++  ++ SLRRQIG+V QD++LF+ TV ENI+L  P A  +E+I AA
Sbjct: 812 SPLEGEILIDGYDISKVELYSLRRQIGIVPQDSLLFQGTVEENISLTKPNATTDEIITAA 871

Query: 601 TLAGAHEFILELPDGYETLIGEHGASLSGGQRQRIAIARALFGNPRILIFDEATSALDYE 660
             AGAH+FI+ LP GY T +GE G +LSGGQRQRIAIAR +  NP++LI DEATSALDY+
Sbjct: 872 KAAGAHDFIMTLPLGYNTRVGERGGALSGGQRQRIAIARTVLQNPQLLILDEATSALDYD 931

Query: 661 SERIIQQNMARICAQRTVIIIAHRLSAVRHADRIVVMERGQIIEQGTHDELLGYPQGTYA 720
           +ER +  N+ +    +TV  I HRLS VRHADRI+VM++G ++EQG+HDEL+   +G Y 
Sbjct: 932 TERQVSINLQQHFRGKTVFFITHRLSTVRHADRIIVMDKGAMVEQGSHDELMEL-RGRYF 990

Query: 721 YLHQLQ 726
            L++ Q
Sbjct: 991 CLYRQQ 996