Pairwise Alignments

Query, 731 a.a., Cyclolysin secretion/processing ATP-binding protein CyaB from Pseudomonas putida KT2440

Subject, 617 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  268 bits (685), Expect = 6e-76
 Identities = 192/558 (34%), Positives = 290/558 (51%), Gaps = 19/558 (3%)

Query: 180 VSLVIQILALLTPLFFQVVMDKVLVHRGLTTLDVIALGLLVVV----LFETLLSGLRTYV 235
           V L+ ++  ++ PLF++  +D + V        V+ LG++       L     + +R  +
Sbjct: 48  VLLLAKLAGVVVPLFYKHAVDALSVPERAAI--VLPLGVIAAYGLARLGNLAFTEIRDLL 105

Query: 236 AAHTASRIDVELGAKLFRHLIDLPTAYFHARRVGDSVARVRELEN------IRSFLTNNS 289
            A    R    L  + FRHL  L +  FH  R    ++RV E         +R F+    
Sbjct: 106 FARVIERAIHVLSLRTFRHLHGL-SLRFHLDRQTGGLSRVIERGTRAIEVVLRQFVLRAG 164

Query: 290 ITLVLDVLFSVVFIAVMFLYSGWLTLVVVGSLPFYFLVSLVVTPLLRALIDQSFQRGAEN 349
            +L+  V+   V   +  LY     +V+VG+L  Y   +L +T              AE 
Sbjct: 165 PSLIELVMVCGV---LWTLYDWTYAVVMVGALAVYVAWTLAITEWRLDFRRSMNTHDAEA 221

Query: 350 QAFLVEAVNGIDTLKSMAVEPQVTRRWNDQLAAYVSASFKTQNLSSLANESVGLIGKLVT 409
            +  ++++   +T+K    E    +R++  L+AY   + K+    SL N     I  L  
Sbjct: 222 SSKAIDSLINYETVKYFGNEEHEAKRFDRALSAYEEVAVKSHRSLSLLNVGQSAIISLSL 281

Query: 410 VATLWLGARLVIEGALTVGELIAFNMLAGRVSQPIIRLAQLWTSFQQTGVSIQRLGDILN 469
           VA + + A  +  G +T G+ +  N    ++  P+  L  ++   +Q  V ++ L  +++
Sbjct: 282 VAVMIMAAVDIRGGRMTPGDFVLVNTYLLQLYVPLNFLGMVYREVKQGLVDMEVLFGLID 341

Query: 470 TRTEV-NQGKGTVLPTLVGQIELDRVCFRYRPDGGEVVRDVSLKIAAGEVIGVVGRSGSG 528
              EV +      L    G +  + V F Y P+  EV++ VSL+I AG  + VVG SG+G
Sbjct: 342 RPPEVADPANAADLVVRGGAVRFEGVRFAYNPER-EVLKGVSLEIPAGGTLAVVGHSGAG 400

Query: 529 KSTLTRLIQRLYSPERGRVLPDGADLAVADVASLRRQIGVVLQDNVLFRRTVRENIALGN 588
           KSTL+RL+ R Y    GRVL DG DL     ASLRR IG+V QD VLF  T+  NIA G 
Sbjct: 401 KSTLSRLLFRFYDVTGGRVLIDGQDLRDVTQASLRRAIGIVPQDTVLFNDTIGYNIAYGR 460

Query: 589 PAAPLEEVIAAATLAGAHEFILELPDGYETLIGEHGASLSGGQRQRIAIARALFGNPRIL 648
           P A  +EV  AA LA  H+F+  L +GY+T +GE G  LSGG++QR+AIAR +  +P IL
Sbjct: 461 PGASRQEVERAARLAAIHDFVQSLKNGYDTQVGERGLKLSGGEKQRVAIARTILKDPAIL 520

Query: 649 IFDEATSALDYESERIIQQNMARICAQRTVIIIAHRLSAVRHADRIVVMERGQIIEQGTH 708
           I DEATSALD  +ER IQ  +  +   RT ++IAHRLS V  ADRI+V++ G++ E G+H
Sbjct: 521 ILDEATSALDSHTEREIQGALRDVSRGRTTLVIAHRLSTVIDADRILVLDGGRVAESGSH 580

Query: 709 DELLGYPQGTYAYLHQLQ 726
           D+LL   +G YA L + Q
Sbjct: 581 DDLL-RAEGLYAALWRKQ 597