Pairwise Alignments

Query, 477 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 469 a.a., Type I secretion outer membrane protein, TolC from Pseudomonas syringae pv. syringae B728a

 Score =  155 bits (391), Expect = 4e-42
 Identities = 118/421 (28%), Positives = 197/421 (46%), Gaps = 14/421 (3%)

Query: 26  STVKTDLVSVYQEAVDNNADLAAARADYGARREVVPQARAGLLPNLSAGAEMMNTRTKLD 85
           S    DL+ +Y+EA   +  + +A     +  +    A  GLLP ++A         K D
Sbjct: 36  SAYSVDLMKLYREARLEDPRMLSAYLRAQSAVDSERDAFGGLLPQVTANGSYNRILRKDD 95

Query: 86  EPSITSNRSGNSWSATLAQPIFRADRWFQLQAAEAVNEQAALELSATEQNLILQTAQNYF 145
                 N S  S+S  L Q ++    W   Q A++  EQ   +    +    +  A+ YF
Sbjct: 96  TQREIYNNS--SYSLNLTQYLYNKQAWEAYQKAKSTTEQKGHQAEDAQAEATVDLAKRYF 153

Query: 146 AVLRAQDNLAATKAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQASYDTARANRIIAERQ 205
             L A D L    AE  A ++ LD+ +  +D  ++  TD+L  +A  D   A  + A  Q
Sbjct: 154 QALSADDELELIMAERRATQKSLDRVSAMYDKKMAVVTDLLDLKARVDLLAAQEVDARNQ 213

Query: 206 VQDAFEALVTLTNREYTS-IQGVVHSLPVQVPTPNDAKAWVETAGRQNLNLLATNYAVSA 264
           ++ +  AL  +  R  T  +  + + + +Q P+ +    WV  A   N  L A   ++  
Sbjct: 214 IRLSRAALSEIVGRPITEPLSRIRNDIALQAPSKS-MDTWVAQAIDSNPLLKARESSLDV 272

Query: 265 AEETLRQRKAGHAPTLDAVAKYQKGDNDSLGFTNPSQLGVRYSGDVEQTSVGLQLNIPIY 324
           A   +R+ K GH PTL      Q+ D   +G+ N     +    D    ++G++  +PIY
Sbjct: 273 ANAAVREGKGGHYPTLTFTLGAQQSD---VGYDNT----LSPRSDSYVATIGVR--VPIY 323

Query: 325 SGGLTSSQVREAYQRLSQSEQQRESLRRQVVENTRNLHRAVNTDVEQVQARKQSIISNQS 384
           SGG TS++VR  Y     +EQ  ES+RRQVV+ T N +    + VE+++A K ++ S + 
Sbjct: 324 SGGSTSARVRGLYNEQLATEQDVESVRRQVVKETTNAYLTAFSSVEKIRANKNALASAEQ 383

Query: 385 ALEATEIGYQVGTRNIVDVLDAQRQLYTSVRDYNNSRYDYILDNLSLKQAAGTLSPQDLQ 444
           +  A +  +  G  N VDVL + +  + + RD   ++YD+I +   L + AG   PQ+  
Sbjct: 384 SSIAAQKAFSYGVVNAVDVLTSVQNEFKARRDLLRAQYDFITNLFILNRWAGR-PPQESV 442

Query: 445 D 445
           D
Sbjct: 443 D 443