Pairwise Alignments

Query, 477 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 463 a.a., TolC family outer membrane protein from Rhodopseudomonas palustris CGA009

 Score =  121 bits (303), Expect = 6e-32
 Identities = 124/454 (27%), Positives = 199/454 (43%), Gaps = 53/454 (11%)

Query: 9   IAVSCASNGVVWAADVPSTVKTDLVSVYQEAVDNNADLAAARADYGARREVVPQARAGLL 68
           I ++CAS  V  A     T++  LV  YQ     N  L A RA   A  E VPQA +G  
Sbjct: 15  IVLACASQTVALA----DTMEGALVRAYQ----TNPQLNAQRASVRATDESVPQALSGYR 66

Query: 69  PNLSAGAEMMNTRTKL------DEPSITSNRSGNSWSATLAQPIFRADRWF-QLQAAEAV 121
           P ++  A      T +       +  ++  +   S   T +Q +F  ++   + +AAE+ 
Sbjct: 67  PKVAVTASGGYQYTDVISSVAGSQFHLSGTQIPRSVGVTASQTLFNGNQTANRTRAAESQ 126

Query: 122 NEQAALELSATEQNLILQTAQNYFAVLRAQDNLAATKAEEAAFKRQLDQSNERFDVGLSD 181
              A   L   EQ+++L  A  Y   LR    L   ++     ++ L Q+N+RF+VG   
Sbjct: 127 VSSAREGLRVLEQSVLLSAATIYMDYLRDSATLEVQRSNVRVLEQTLRQTNDRFNVGEVT 186

Query: 182 KTDVLQSQASYDTARANRIIAERQVQDAFEALVTLTNREYTSIQG-----VVHSLPVQVP 236
           +TDV QSQA        ++ A    Q A E+ +T T   Y  I G     +    PV   
Sbjct: 187 RTDVAQSQA--------QLAAGNTQQLAAESTLTTTRSNYRRIIGTEPGNLAPGSPVDRY 238

Query: 237 TPNDAKAWVETAGRQNLNLLATNYAVSAAEETLRQRKAGHAPTLDAVAKYQKGDNDSLGF 296
            P      +  A  +N N+ A  Y +  +   ++  +    PTL   A  Q+    S+  
Sbjct: 239 LPTSLAQAINLALVENPNVTAAMYGIDVSYLNVKINEGALFPTLTLQASAQQSWEPSI-- 296

Query: 297 TNPSQLGVRYSGDVEQTSVGLQLNIPIYSGGLTSSQVREAYQRLSQSEQQRESLRRQVVE 356
           ++P Q          Q S   QL++PIY GG   + +R++ + L+Q     E +R Q   
Sbjct: 297 SSPRQF---------QASGVAQLSVPIYQGGGEYALIRQSKETLAQQRLNLEQVRDQT-- 345

Query: 357 NTRNLHRAVNTDVEQVQARKQSIISNQSALEATEIGY-------QVGTRNIVDVLDAQRQ 409
                  +V     Q+QA K  + S QS ++A+EI         + G R  +DVL+AQ+ 
Sbjct: 346 -----RASVVQAWGQLQAAKAQVSSAQSQVKASEIALNGVREEARAGQRTTLDVLNAQQA 400

Query: 410 LYTSVRDYNNSRYDYILDNLSLKQAAGTLSPQDL 443
           L  +      +++D ++ + ++  A G LSPQ L
Sbjct: 401 LVNARVALVTAQHDRVVASYAVLNAVGRLSPQVL 434