Pairwise Alignments

Query, 477 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 496 a.a., RND transporter from Cupriavidus basilensis FW507-4G11

 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 97/388 (25%), Positives = 166/388 (42%), Gaps = 39/388 (10%)

Query: 42  NNADLAAARADYGARREVVPQARAGLLPNLSAGAEMMNTRTKLDEPSITSNRSGNSWSAT 101
           +N ++ AA A Y      +  ARAG  P + A A        L+  S +S   GNS +AT
Sbjct: 91  SNQNIKAAEAQYRQALAALQSARAGYFPTVGASAG-------LNRASGSSGLIGNSQNAT 143

Query: 102 LAQPIFRADRWF----QLQAAEAVNEQAALELSATEQNLILQTAQNYFAVLRAQDNLAAT 157
           L+   +  D W     Q++++EA  + +  +L++T  +     AQ+YF +  A    A  
Sbjct: 144 LSAS-WEIDVWGRVRRQVESSEASAQASQSDLASTLLSTQSTLAQSYFLLRIADQQKALL 202

Query: 158 KAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQASYDTARANRIIAERQVQDAFEALVTLT 217
                 +++ L     ++  G + ++DVLQS+    +A+A +I  +        AL  LT
Sbjct: 203 DRTVVDYEKSLQLVRNQYAAGTAQRSDVLQSETQLKSAQAQQIDIQITRAQLEHALAILT 262

Query: 218 NREYTSIQ-------GVVHSLPVQVPTPNDAKAWVETAGRQNLNLLATNYAVSAAEETLR 270
            +   ++          V  +PV VP+     A +E    +  ++ A    ++AA   + 
Sbjct: 263 GKPPANLSIAPQDYAAAVPRVPVAVPS-----ALLE----RRPDIGAAERRMAAANAQIG 313

Query: 271 QRKAGHAPTLDAVAKYQKGDNDSLGFTNPSQLGVRYSGDVEQTSVGLQLNIPIYSGGLTS 330
             +A + PTL   A          G  +   L    S      S+G  L   ++ GGL S
Sbjct: 314 VAQAAYYPTLSLSA---------TGGLSAGTLARWLSLPDRVWSIGPALAGTLFDGGLRS 364

Query: 331 SQVREAYQRLSQS-EQQRESLRRQVVENTRNLHRAVNTDVEQVQARKQSIISNQSALEAT 389
           +   +A     Q+    R+++     E   NL  A   + E V  +  ++ S + AL   
Sbjct: 365 AAKAQAVAAYDQTVANYRQTVLAAFQEVEDNLAGARLLEQEGV-VQNDALRSARDALALV 423

Query: 390 EIGYQVGTRNIVDVLDAQRQLYTSVRDY 417
              Y+ GT +++DVL AQ   YT+ R Y
Sbjct: 424 NNRYRAGTASLLDVLTAQTTAYTAERTY 451