Pairwise Alignments

Query, 427 a.a., Transporter, NCS1 nucleoside transporter family from Pseudomonas putida KT2440

Subject, 411 a.a., cytosine permease from Methanococcus maripaludis S2

 Score = 88.6 bits (218), Expect = 3e-22
 Identities = 87/387 (22%), Positives = 168/387 (43%), Gaps = 30/387 (7%)

Query: 21  GARDLFSLWFSLGIGLMVLQVGAMLAPGLGLAGAVLAIALGTGVGVLLLGAAGVIGSDTG 80
           G   +F++          +  G  +  GL     +LA+ +G  +  L  GA   IGS TG
Sbjct: 23  GFLPMFAIMLGFTFFSASMWAGGTIGTGLKFQTFLLAVLMGNLLLGLYTGALAYIGSSTG 82

Query: 81  LSAMGTLKLSLGSHGARLPALLNLLQLVGWGAFEIIVMRDAASLLGARAFGEESAWNSPM 140
           LS     + S G  G+ L + +  +  VGW    + +                   +  +
Sbjct: 83  LSTHLLARYSFGEKGSYLASFILAITQVGWFGVGVAMFSLPVHYATGIDLNILLLLSGIL 142

Query: 141 LWTLCFGALATLLAVSGPLAFVRKVLRAWGIWLLLGACLWLTWNLFAKADLAELWNRAGD 200
           + T  +  + +L  +S         +   GI+ + GA       + +   ++EL+     
Sbjct: 143 MTTTAYFGIKSLTVLS---MISVPAITLLGIYSVTGA-------VNSIGGISELFAIEPA 192

Query: 201 GSMSLAVGFDIVIAMPLSWLPLIADYSRFARNGRHVFGGTVVGYFIGNTWLMSLGV--AY 258
            ++ LAVG  + I   +S   L  D+SRF+++       T + +FIGN+ +   G   A 
Sbjct: 193 NNLGLAVGLSLCIGSFISGGTLTPDFSRFSKSKSIGVISTFIAFFIGNSLMFIFGAVGAS 252

Query: 259 TLAFAASGEVNALLLALAGAGMGIPLLLIL-LDESEKAFADIHSAAVSTGVLLPLKVEHL 317
           TL  +   EV      +   G+ IP ++IL L+        ++++ +    +  +  +H+
Sbjct: 253 TLGQSDISEV------MLKQGLIIPAIIILGLNIWTTNDNALYASGLGFSNITKIPKKHV 306

Query: 318 ALAIGVLCTLIALLAPLAQYENF---LLLIGSVFAPLFGVVLMDHYVVRRRRLPA----Q 370
            +  G++ TL AL+     Y NF   L L+ S+   + G+++ D+++ +R++  +    +
Sbjct: 307 VIFNGLIGTLGALVL----YNNFVGWLTLLSSIIPSIGGIIISDYFINKRQKYASLENIK 362

Query: 371 VNGLHWQALVAWFTGVVAYHLIAAKAP 397
           V  +HW A++AW  GV A   +   +P
Sbjct: 363 VKKVHWNAVIAWVLGVFASQFLPGISP 389