Pairwise Alignments

Query, 634 a.a., DNA topoisomerase IV subunit B from Pseudomonas putida KT2440

Subject, 686 a.a., DNA topoisomerase IV subunit B from Sinorhizobium meliloti 1021

 Score =  443 bits (1140), Expect = e-128
 Identities = 266/628 (42%), Positives = 375/628 (59%), Gaps = 26/628 (4%)

Query: 7   SAYNADAIEVLSGLDPVRKRPGMY---TDTSRPNHLAQEVIDNSVDEALAGHARSVQVIL 63
           S Y+A AIEVL GL+PVR+RPGMY   TD    +HL  EVIDNS+DEA+AGHA  + V L
Sbjct: 45  SDYDASAIEVLEGLEPVRRRPGMYIGGTDEKALHHLFAEVIDNSMDEAVAGHANFIDVNL 104

Query: 64  HADHSLEVSDDGRGMPVDIHPE-EGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGISV 122
            AD  L V+D+GRG+PV+ HP+  G S +E+++T LHAGGKF  K Y+ SGGLHGVG+SV
Sbjct: 105 DADGYLTVTDNGRGIPVENHPKFPGKSTLEVVMTVLHAGGKFDGKAYETSGGLHGVGVSV 164

Query: 123 VNALSTQVRVRVKRDGNEYQMTFADGFKASELEVVGSVGKRNTGTSVYFSPDPKYFDS-P 181
           VNALS  + V V R+   Y+  F+ G     LE +G V  R  GT V F PDP+ F    
Sbjct: 165 VNALSDDLEVEVARNRRLYRQRFSRGIAQGGLEDLGDVHNRR-GTRVRFHPDPQIFGPHA 223

Query: 182 KFSISRLKHVLKAKAVLCPGLLVSF--------EDKASGEKVEWHYEDGLRSYLVDSVNE 233
           +F  +RL  + ++KA L  G+ + +        E     ++  +H+  GL+ YL  ++ +
Sbjct: 224 RFEPARLFRMARSKAYLFGGVEIRWSCDPALLPEGSEIPDRAVFHFPGGLKDYLAATLGK 283

Query: 234 FQRLPDEPFCGSL--AGNKEAVDWALLWLPEGGDSIQESYVNLIPTAQGGTHVNGLRQGL 291
              +  E F G    +G   +++WA+ W   GGD    SY N IPT +GGTH  GLR  L
Sbjct: 284 EFTVTREIFAGKSEKSGGHGSLEWAVTWY--GGDQQIHSYCNTIPTPEGGTHEAGLRIAL 341

Query: 292 LDAMREFCEFRNLLPRGVKLAPEDVWERITFVLSMKMQDPQFSGQTKERLSSREAAAFVS 351
              ++ + E      R   +  +DV      +LS+ +++P+F GQTK++L++ EA   V 
Sbjct: 342 TKGLKNYAELTQN-KRAAIVTTDDVMISAAGMLSVFIREPEFVGQTKDKLATVEAQRIVE 400

Query: 352 GVVKDAFSLWLNAHPELGMQLAELAISNAGRRLKA--SKKVERKRITQGPALPGKLADCA 409
             ++D F  +L  +P    +L +  +  A  R++    K+V RK   +   LPGKLADCA
Sbjct: 401 NALRDPFDHYLADNPAEAAKLLDWVVERAEERVRRRKEKEVSRKTAVRKLRLPGKLADCA 460

Query: 410 GQDPMRAELFLVEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGGEVLASQEVHNIA 469
                 AELF+VEGDSAGGSAKQAR++  QAILPLRGKILN       ++ A+Q++ ++ 
Sbjct: 461 QNTAEGAELFIVEGDSAGGSAKQARNRANQAILPLRGKILNVASAGREKLGANQQIGDLV 520

Query: 470 VAIGVDPGATDLAQ-LRYGKICILADADSDGLHIATLLCALFVQHFRTLVEAGHVYVAMP 528
            A+G    +    + LRY +I I+ DAD DG HIA+LL   F Q    L+  GH+Y+A+P
Sbjct: 521 QALGCGTRSKYREEDLRYERIIIMTDADVDGAHIASLLITFFYQEMPELIRGGHLYLAVP 580

Query: 529 PLYRIDLGKEIYYALDEAERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPN 588
           PLYR+  G +  YA D+A R+ ++        RGK ++ RFKGLGEM P QL+ETTMDP 
Sbjct: 581 PLYRLSQGSKTLYARDDAHREELM--RTEFNGRGKVELGRFKGLGEMLPAQLKETTMDPA 638

Query: 589 TRRLVQLTLDDV--EATCELMDKLLAKK 614
            R L+++ +DDV  E T + +D L+  K
Sbjct: 639 KRTLLKVEIDDVDFEGTRDAVDSLMGTK 666