Pairwise Alignments

Query, 634 a.a., DNA topoisomerase IV subunit B from Pseudomonas putida KT2440

Subject, 665 a.a., Gram negative topoisomerase IV, subunit B (NCBI) from Rhodospirillum rubrum S1H

 Score =  457 bits (1176), Expect = e-133
 Identities = 271/636 (42%), Positives = 372/636 (58%), Gaps = 31/636 (4%)

Query: 6   ASAYNADAIEVLSGLDPVRKRPGMY---TDTSRPNHLAQEVIDNSVDEALAGHARSVQVI 62
           A AY A +IEVL GL+PVR+RPGMY   TD    +HL  E++DN++DEA+AG+A+ + + 
Sbjct: 14  ADAYTARSIEVLEGLEPVRRRPGMYIGGTDERALHHLVAEILDNAMDEAVAGYAQVIDID 73

Query: 63  LHADHSLEVSDDGRGMPVDIHPE-EGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGIS 121
           L  D S+ V D+GRG+P+D HP     S +E+ILT LH+GGKF    Y+ SGGLHGVGIS
Sbjct: 74  LAVDGSVCVRDNGRGIPIDPHPRFPDKSALEVILTTLHSGGKFGGDAYKVSGGLHGVGIS 133

Query: 122 VVNALSTQVRVRVKRDGNEYQMTFADGFKASELEVVGSVGKRNTGTSVYFSPDPKYFDS- 180
           VVNALS  +RV V RD   +   F  G     L+ +G    R  GT V F PD + F   
Sbjct: 134 VVNALSDSLRVEVARDRTLWAQDFCRGAPLGPLQKIGPAPNRR-GTQVRFHPDAEIFGPR 192

Query: 181 PKFSISRLKHVLKAKAVLCPGLLVSF--------EDKASGEKVEWHYEDGLRSYLVDSVN 232
            +F  + L  + ++KA L  G+ + +        +D     +  +H+ +GL  YL  ++ 
Sbjct: 193 ARFKPALLHRMARSKAYLFRGVRIRWSCAPELLPDDAGVPAEDVFHFPNGLGDYLGHALA 252

Query: 233 EFQRLPDEPFCGS--LAGNKEAVDWALLWLPEGGDSIQESYVNLIPTAQGGTHVNGLRQG 290
               +    F G+  L  +   V+WAL W PE  +    SYVN IPT +GGTH  GLR  
Sbjct: 253 NRPLVGGRTFAGTANLPDDMGTVEWALCW-PEDDEPFFNSYVNTIPTPEGGTHEAGLRNA 311

Query: 291 LLDAMREFCEFRNLLPRGVKLAPEDVWERITFVLSMKMQDPQFSGQTKERLSSREAAAFV 350
           L   +R F E          L  EDV      + SM ++DPQF GQTKE+L+S+EA   V
Sbjct: 312 LTRGLRSFAEMSGNKKGAAALTAEDVVGGAAVMFSMFLRDPQFQGQTKEKLASQEATRLV 371

Query: 351 SGVVKDAFSLWLNAHPELGMQLAELAISNAGRRL--KASKKVERKRITQGPALPGKLADC 408
              ++D F  WL   P+    L   A+  A  RL  + +K+  RK  T+   LPGKL+DC
Sbjct: 372 EQALRDPFDHWLTGAPDSANLLLTHALERADERLRRRQAKETSRKTATKKLRLPGKLSDC 431

Query: 409 AGQDPMRAELFLVEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGGEVLASQEVHNI 468
                   ELFLVEGDSAGGSAKQARD++ QA+LPLRGKILN       ++  +QE+ ++
Sbjct: 432 TRSTRQGTELFLVEGDSAGGSAKQARDRQTQAVLPLRGKILNVASASLDKLRGNQELSDL 491

Query: 469 AVAIGVDP-GATDLAQLRYGKICILADADSDGLHIATLLCALFVQHFRTLVEAGHVYVAM 527
           A A+G    GA DL  LRY K+ I+ DAD DG HIA+LL   F +    LV AGH+Y+AM
Sbjct: 492 AEALGCGTRGAFDLEHLRYDKVVIMTDADVDGAHIASLLMTFFFREMPALVSAGHLYLAM 551

Query: 528 PPLYRIDLGKEIYYALDEAERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDP 587
           PPLYR+  G    YA D+A +D ++  +   K +GK +++RFKGLGEM P QLRETTM  
Sbjct: 552 PPLYRLTQGGTSVYARDDAHKDQLMKTVF--KTKGKVEISRFKGLGEMPPAQLRETTMAY 609

Query: 588 NTRRLVQLTL---------DDVEATCELMDKLLAKK 614
            TR+L+++T+         +D   T +L+++L+ +K
Sbjct: 610 ATRQLLRVTVPGGKTEEDREDARETAKLVEELMGRK 645